RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 DEFA4P12838 97 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 IFITM1P13164 125 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 DYNLT3P51808 116 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 UBA52P62987 128 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 ZNF846Q147U1 533 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 Q56UQ5 140 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 MRPL54Q6P161 138 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 BPIFA4PQ86YQ2 179 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 HIST3H2BBQ8N257 126 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 WFDC5Q8TCV5 224 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 PRELID3AQ96N28 172 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 SCGB3A1Q96QR1 104 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 HIST1H2BLQ99880 126 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 SEC11CQ9BY50 192 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 DPY30Q9C005 99 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 MED9Q9NWA0 146 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 MYOM2P54296 1465 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 ARHGAP35Q9NRY4 1499 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 MED1Q15648 1581 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 CDK5RAP2Q96SN8 1893 aa1.92□□□□□ -2.1
TRAPPC13-205ENST00000504243 MYOM3Q5VTT5 1437 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 CITO14578 2027 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 BAZ1AQ9NRL2 1556 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 MED14O60244 1454 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 PZPP20742 1482 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 MAGI1Q96QZ7 1491 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 TRAV12-2A0A075B6T6 113 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 A0A0D9SEW6 157 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 LOC100130705A0A1B0GUX0 176 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 ODAMA1E959 279 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 TMEM262E9PQX1 116 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 H3BQF6 201 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 H7C2G1 150 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 APOC4-APOC2K7ER74 178 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 TMEM256-PLSCR3K7ERE1 68 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 KLF7O75840 302 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 TCL1BO95988 128 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 APOC2P02655 101 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 MT-ND6P03923 174 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 CD2P06729 351 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 SPINK8P0C7L1 97 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 MRPS36P82909 103 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 MIR17HGQ75NE6 70 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 TEN1Q86WV5 123 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 DYNAPQ8N1N2 210 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 C10orf111Q8N326 155 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 C5orf17Q8NAS9 161 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 STAG3L4Q8TBR4 150 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 SDF2Q99470 211 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 NPCDR1Q9BY65 106 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 FKBP11Q9NYL4 201 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 EPDR1Q9UM22 224 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 RNF11Q9Y3C5 154 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 HEATR5AQ86XA9 2040 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 COL11A1P12107 1806 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 ZFYVE16Q7Z3T8 1539 aa1.91□□□□□ -2.1
TRAPPC13-205ENST00000504243 MYH9P35579 1960 aaKnown RBP1.9□□□□□ -2.1
TRAPPC13-205ENST00000504243 A2ML1A8K2U0 1454 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 MBD5Q9P267 1494 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRAV7A0A075B6U4 112 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 PIGBOS1A0A0B4J2F0 54 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 ZNF727A8MUV8 499 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 TCRAP04437 139 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 MSMBP08118 114 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRAPPC2P0DI81 140 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRAPPC2BP0DI82 140 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 TPT1P13693 172 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 FABP4P15090 132 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 NFYAP23511 347 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 ETV6P41212 452 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 ARPP19P56211 112 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 SUPT4H1P63272 117 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 CATR1Q13166 79 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 DPPA3Q6W0C5 159 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 TMEM91Q6ZNR0 172 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 FOXI2Q6ZQN5 318 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 AAED1Q7RTV5 226 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 MORN4Q8NDC4 146 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 PLPP5Q8NEB5 264 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 DPH3Q96FX2 82 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 NHP2Q9NX24 153 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 BET1LQ9NYM9 111 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 COMMD3Q9UBI1 195 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 TPRKBQ9Y3C4 175 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 CHCHD2Q9Y6H1 151 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 AKAP12Q02952 1782 aa1.9□□□□□ -2.11
TRAPPC13-205ENST00000504243 DOCK10Q96BY6 2186 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 NUP98P52948 1817 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 ADGRL2O95490 1459 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 ARHGEF28Q8N1W1 1705 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 TRBV20-1A0A075B6N2 111 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 IGHV1-18A0A0C4DH31 117 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 C3orf85A0A1B0GTC6 90 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 FAM236AA0A1B0GUQ0 79 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 FAM236BA0A1B0GV22 79 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 FAM24AA6NFZ4 105 aa1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 ZNF705FA8MVS1 300 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 GEMIN2O14893 280 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-205ENST00000504243 RER1O15258 196 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms