RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 EDA2RQ9HAV5 297 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 VPREB3Q9UKI3 123 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 C9JAW5 83 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 MPV17L2Q567V2 206 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 IGHV1-24A0A0C4DH33 117 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 SDHAF1A6NFY7 115 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 PRSS29PA6NIE9 313 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 LHBP01229 141 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 DEFB113Q30KQ7 82 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 MYLKQ15746 1914 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 RLFQ13129 1914 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 NXPH4O95158 308 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 IGKV1-39P01597 117 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 IGKV1D-39P04432 117 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 PRR25Q96S07 402 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 FAM231BA6NCW3 169 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 IGHV2-70P01814 119 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 SUMO4Q6EEV6 95 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 FOXI2Q6ZQN5 318 aa5.7□□□□□ -1.5
SYNPO2-205ENST00000504178 SMIM27A0A1W2PRY6 76 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 MMP23AO75900 390 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 IGHV4-59P01825 116 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 SPINK8P0C7L1 97 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 SOCS3O14543 225 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 ANGP03950 147 aaKnown RBP5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 A0A0J9YY99 117 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 H3BMM0 161 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 WT1-ASQ06250 92 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 VOPP1Q96AW1 172 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 NOP10Q9NPE3 64 aaKnown RBP5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 TRAV25A0A0B4J276 109 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 CCL24O00175 119 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 Q0VG73 95 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 UBE2WQ96B02 151 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 ZC2HC1AQ96GY0 325 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 KLF5Q13887 457 aaPredicted RBP5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 SCRT2Q9NQ03 307 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 ADCYAP1P18509 176 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 GRNP28799 593 aaKnown RBP5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 ZNF726P1Q15940 193 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 C9orf66Q5T8R8 295 aa5.69□□□□□ -1.5
SYNPO2-205ENST00000504178 NLRC5Q86WI3 1866 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 PRB1P04280 392 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 ADAMTSL5Q6ZMM2 481 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 MRPL53Q96EL3 112 aaKnown RBP5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 IGKV2D-24A0A075B6R9 120 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 IGKV1OR2-108A0A075B7D4 117 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 C18orf32Q8TCD1 76 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 CNTRLQ7Z7A1 2325 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 HERVK_113P63121 156 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 OR11H6Q8NGC7 330 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 FXYD5Q96DB9 178 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 A0A1B0GUS0 222 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 SRSF2Q01130 221 aaKnown RBP5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 RHOHQ15669 191 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 ATP6V0BQ99437 205 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 KAAG1Q9UBP8 84 aa5.68□□□□□ -1.5
SYNPO2-205ENST00000504178 CRLF1O75462 422 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 DEFB136Q30KP8 78 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 Q6ZQT7 251 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 V9GYV3 84 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 MRPL52Q86TS9 123 aaKnown RBP5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 ZNF524Q96C55 264 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 CD5LO43866 347 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 ASPHD1Q5U4P2 390 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 PRSS57Q6UWY2 283 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 C8orf31Q8N9H6 132 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 FANCMQ8IYD8 2048 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 K7EM74 188 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 SLURP1P55000 103 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 SLAQ13239 276 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 TAL2Q16559 108 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 IGLC1P0CG04 106 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 DKK4Q9UBT3 224 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 U3KQE9 123 aa5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 NUP210Q8TEM1 1887 aaPredicted RBP5.67□□□□□ -1.5
SYNPO2-205ENST00000504178 IGFBPL1Q8WX77 278 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 NDUFA12Q9UI09 145 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 FOXE3Q13461 319 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 SPRNQ5BIV9 151 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 FAM231DQ6ZW35 169 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 CFHR4Q92496 578 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 CTSZQ9UBR2 303 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 POLR3KQ9Y2Y1 108 aaPredicted RBP5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 GNRH2O43555 120 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 NDUFS7O75251 213 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 UBE2BP63146 152 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 APRG1Q8IVJ8 170 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 SLX1AQ9BQ83 275 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 SIGLEC8Q9NYZ4 499 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 PTPRDP23468 1912 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 NPYP01303 97 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 LTAP01374 205 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 INAFM2P0DMQ5 153 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 IGHV4-38-2P0DP08 117 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 HLA-DMBP28068 263 aa5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 RPL18AQ02543 176 aaKnown RBP5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 C1orf147Q96MC9 270 aaPredicted RBP5.66□□□□□ -1.5
SYNPO2-205ENST00000504178 F6UB75 175 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms