RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157	IGHV1-46	P01743	117 aa		13.99	□□□□□ -0.17
POLR2J3-209	ENST00000504157	TPSG1	Q9NRR2	321 aa		13.99	□□□□□ -0.17
POLR2J3-209	ENST00000504157	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	ZNF688	P0C7X2	276 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	SIGLEC15	Q6ZMC9	328 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	RAX2	Q96IS3	184 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	SCNM1	Q9BWG6	230 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	MED13	Q9UHV7	2174 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157		K7EM74	188 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	RPL27A	P46776	148 aa	Known RBP	13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	LYZ	P61626	148 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	PIP4P1	Q86T03	277 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	DEFB124	Q8NES8	71 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	NGB	Q9NPG2	151 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	MRPL35	Q9NZE8	188 aa	Known RBP	13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	CACNA1G	O43497	2377 aa		13.98	□□□□□ -0.17
POLR2J3-209	ENST00000504157	NCBP2L	A6PVI3	153 aa	Known RBP	13.97	□□□□□ -0.17
POLR2J3-209	ENST00000504157	RHOD	O00212	210 aa		13.97	□□□□□ -0.17
POLR2J3-209	ENST00000504157	PTH2	Q96A98	100 aa		13.97	□□□□□ -0.17
POLR2J3-209	ENST00000504157	GAGE12J	A6NER3	117 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157		M0R1B8	84 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	GAGE7	O76087	117 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	GAGE12F	P0CL80	117 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	GAGE12G	P0CL81	117 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	GAGE12I	P0CL82	117 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	GAGE4	Q13068	117 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	COX8C	Q7Z4L0	72 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	SBSPON	Q8IVN8	264 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	RPE	Q96AT9	228 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	SHANK2-AS3	Q9BTD1	123 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	NBEA	Q8NFP9	2946 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	TMSB15B	A0A087X1C1	80 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	PSMB2	P49721	201 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	UBE2D3	P61077	147 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	UBE2D2	P62837	147 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	DIAPH2-AS1	Q14236	149 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	SMIM20	Q8N5G0	67 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	RNF185	Q96GF1	192 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	C8orf49	Q96NF6	230 aa		13.96	□□□□□ -0.17
POLR2J3-209	ENST00000504157	CRYGB	P07316	175 aa		13.95	□□□□□ -0.18
POLR2J3-209	ENST00000504157	CCL3L1	P16619	93 aa		13.95	□□□□□ -0.18
POLR2J3-209	ENST00000504157		H3BRN7	92 aa		13.95	□□□□□ -0.18
POLR2J3-209	ENST00000504157	SH2D1A	O60880	128 aa		13.95	□□□□□ -0.18
POLR2J3-209	ENST00000504157	TMEM200B	Q69YZ2	307 aa		13.95	□□□□□ -0.18
POLR2J3-209	ENST00000504157	MYMX	A0A1B0GTQ4	84 aa		13.94	□□□□□ -0.18
POLR2J3-209	ENST00000504157	NDUFV3	P56181	108 aa	Known RBP	13.94	□□□□□ -0.18
POLR2J3-209	ENST00000504157	C1orf122	Q6ZSJ8	110 aa		13.94	□□□□□ -0.18
POLR2J3-209	ENST00000504157	TNFRSF18	Q9Y5U5	241 aa		13.94	□□□□□ -0.18
POLR2J3-209	ENST00000504157		A0A087WX48	190 aa		13.94	□□□□□ -0.18
POLR2J3-209	ENST00000504157	PLN	P26678	52 aa		13.94	□□□□□ -0.18
POLR2J3-209	ENST00000504157	LYRM7	Q5U5X0	104 aa		13.94	□□□□□ -0.18
POLR2J3-209	ENST00000504157	CNOT1	A5YKK6	2376 aa	Known RBP	13.93	□□□□□ -0.18
POLR2J3-209	ENST00000504157	TNFRSF6B	O95407	300 aa		13.93	□□□□□ -0.18
POLR2J3-209	ENST00000504157	BRI3	O95415	125 aa		13.93	□□□□□ -0.18
POLR2J3-209	ENST00000504157	C17orf77	Q96MU5	243 aa		13.93	□□□□□ -0.18
POLR2J3-209	ENST00000504157	CEP250	Q9BV73	2442 aa		13.93	□□□□□ -0.18
POLR2J3-209	ENST00000504157	LINC01549	A6NIU2	74 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	LINC01548	A6NM66	108 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	MRPS12	O15235	138 aa	Known RBP	13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	CNIH1	O95406	144 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	UBE2D1	P51668	147 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	ZFP2	Q6ZN57	461 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	RASL11B	Q9BPW5	248 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	AHCTF1	Q8WYP5	2266 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	FABP5P3	A8MUU1	101 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157		I3L2K1	104 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	CEACAM4	O75871	244 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	IGLC6	P0CF74	106 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	PDE6H	Q13956	83 aa		13.92	□□□□□ -0.18
POLR2J3-209	ENST00000504157	IGHV3-21	A0A0B4J1V1	117 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157		A8MWV9	139 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	TEX22	C9J3V5	150 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	GAS8-AS1	O95177	125 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	IGKV1-17	P01599	117 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157		Q8N8P6	123 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	SVIL	O95425	2214 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	LOC107984156	A0A0G2JMH3	177 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	CCDC179	H3BU77	68 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	GAGE2B	Q13066	116 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	GAGE2E	Q4V326	116 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	ATP1A1-AS1	Q5TC04	95 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	ARL17A	Q8IVW1	177 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	FBXL15	Q9H469	300 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	GAGE2D	Q9UEU5	116 aa		13.91	□□□□□ -0.18
POLR2J3-209	ENST00000504157	IGLV2-18	A0A075B6J9	118 aa		13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	FCN3	O75636	299 aa		13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	PLGLA	Q15195	96 aa		13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	MYOZ3	Q8TDC0	251 aa		13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	SPANXA1	Q9NS26	97 aa		13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	SIGLEC9	Q9Y336	463 aa		13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	TRBV20-1	A0A075B6N2	111 aa		13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	MBD3L3	A6NE82	208 aa	Predicted RBP	13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	KIR2DL4	Q99706	377 aa		13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	CNFN	Q9BYD5	112 aa		13.9	□□□□□ -0.18
POLR2J3-209	ENST00000504157	CENPVL3	A0A0U1RRI6	287 aa		13.89	□□□□□ -0.19
POLR2J3-209	ENST00000504157	WT1	P19544	449 aa	Predicted RBP	13.89	□□□□□ -0.19
POLR2J3-209	ENST00000504157	ASIP	P42127	132 aa		13.89	□□□□□ -0.19

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