RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ERCC8Q13216 396 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 CLINT1Q14677 625 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 GCSAMLQ5JQS6 135 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 Q6ZR54 194 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 EXOC3-AS1Q8N2X6 119 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 SCGB1C1Q8TD33 95 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 MARVELD1Q9BSK0 173 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 AGPAT4-IT1Q9H0P7 198 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 OR51M1Q9H341 326 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 KCNIP2Q9NS61 270 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 PTTG2Q9NZH5 202 aa8.39□□□□□ -1.07
MED28-203ENST00000503945 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 H0YIZ8 118 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 M0R3E3 92 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 GAGE7O76087 117 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 GAGE12IP0CL82 117 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 RNASE4P34096 147 aaKnown RBP8.38□□□□□ -1.07
MED28-203ENST00000503945 ICAM4Q14773 271 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 PPP1R1CQ8WVI7 109 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 GNPNAT1Q96EK6 184 aaPredicted RBP8.38□□□□□ -1.07
MED28-203ENST00000503945 SLC25A2Q9BXI2 301 aa8.38□□□□□ -1.07
MED28-203ENST00000503945 WDR61Q9GZS3 305 aaKnown RBP8.38□□□□□ -1.07
MED28-203ENST00000503945 C7orf71A4D174 169 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 ZNF324O75467 553 aaPredicted RBP8.37□□□□□ -1.07
MED28-203ENST00000503945 IFNA5P01569 189 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 NMBP08949 121 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 PET100P0DJ07 73 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 M6PRP20645 277 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 CSN1S1P47710 185 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 H2BFSP57053 126 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 DAZ2Q13117 558 aaKnown RBP8.37□□□□□ -1.07
MED28-203ENST00000503945 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 FAM122CQ6P4D5 195 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 C9orf47Q6ZRZ4 202 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 MIR17HGQ75NE6 70 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 RNF141Q8WVD5 230 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 PAXXQ9BUH6 204 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 MRPL32Q9BYC8 188 aaKnown RBP8.37□□□□□ -1.07
MED28-203ENST00000503945 FUT9Q9Y231 359 aa8.37□□□□□ -1.07
MED28-203ENST00000503945 TRAV26-1A0A087WT03 109 aa8.36□□□□□ -1.07
MED28-203ENST00000503945 MPC2O95563 127 aa8.36□□□□□ -1.07
MED28-203ENST00000503945 RANP62826 216 aaKnown RBP8.36□□□□□ -1.07
MED28-203ENST00000503945 CD300CQ08708 224 aa8.36□□□□□ -1.07
MED28-203ENST00000503945 LINC00612Q8N6U2 182 aa8.36□□□□□ -1.07
MED28-203ENST00000503945 ZNF680Q8NEM1 530 aa8.36□□□□□ -1.07
MED28-203ENST00000503945 FAM167A-AS1Q96KT0 104 aa8.36□□□□□ -1.07
MED28-203ENST00000503945 TRGV2A0A075B6R0 118 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 A0A0J9YY99 117 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 KLLNB2CW77 178 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 OR10J4P0C629 311 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 RPL12P30050 165 aaKnown RBP8.35□□□□□ -1.07
MED28-203ENST00000503945 ANXA2RQ3ZCQ2 193 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 SSX7Q7RTT5 188 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 LYPD1Q8N2G4 141 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 EIF4E3Q8N5X7 224 aaKnown RBP8.35□□□□□ -1.07
MED28-203ENST00000503945 ZNRF2Q8NHG8 242 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 RXFP4Q8TDU9 374 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 FXYD5Q96DB9 178 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 ZNF503Q96F45 646 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 FAM19A4Q96LR4 140 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 ATP5SQ99766 215 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 VGLL1Q99990 258 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 Q9H8V8 135 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 GSN-AS1Q9NRJ2 163 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 ZNF492Q9P255 531 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 LINC00588Q9Y4M8 146 aa8.35□□□□□ -1.07
MED28-203ENST00000503945 NACAE9PAV3 2078 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 NBDYA0A0U1RRE5 68 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 H3BNG1 76 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 RGS13O14921 159 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 OR7C2O60412 319 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 CRISP2P16562 243 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 ZNF138P52744 262 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 TAS2R45P59539 299 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 FFAR4Q5NUL3 377 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 Q6ZTI0 123 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 ZNF575Q86XF7 245 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 HSPB11Q9Y547 144 aa8.34□□□□□ -1.07
MED28-203ENST00000503945 IGKV2-40A0A087WW87 121 aaPredicted RBP8.33□□□□□ -1.08
MED28-203ENST00000503945 TRGV1A0A0A0MS02 117 aa8.33□□□□□ -1.08
MED28-203ENST00000503945 TRBV7-9A0A0J9YWB2 115 aa8.33□□□□□ -1.08
MED28-203ENST00000503945 IGKV2D-40P01614 121 aaPredicted RBP8.33□□□□□ -1.08
MED28-203ENST00000503945 HOXA5P20719 270 aa8.33□□□□□ -1.08
MED28-203ENST00000503945 BTN1A1Q13410 526 aa8.33□□□□□ -1.08
MED28-203ENST00000503945 SMIM3Q9BZL3 60 aa8.33□□□□□ -1.08
MED28-203ENST00000503945 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
MED28-203ENST00000503945 HSPG2P98160 4391 aa8.32□□□□□ -1.08
MED28-203ENST00000503945 IGHV1OR15-1A0A075B7D0 117 aa8.32□□□□□ -1.08
MED28-203ENST00000503945 A0A1W2PPV4 95 aa8.32□□□□□ -1.08
MED28-203ENST00000503945 ESRGQ1W209 222 aa8.32□□□□□ -1.08
MED28-203ENST00000503945 KHDC3LQ587J8 217 aa8.32□□□□□ -1.08
MED28-203ENST00000503945 C6orf223Q8N319 242 aa8.32□□□□□ -1.08
MED28-203ENST00000503945 C11orf72Q8NBR9 251 aa8.32□□□□□ -1.08
MED28-203ENST00000503945 C18orf15Q96N68 181 aa8.32□□□□□ -1.08
MED28-203ENST00000503945 TMPRSS5Q9H3S3 457 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms