RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 CEACAM3P40198 252 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 LYPD1Q8N2G4 141 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 THYN1Q9P016 225 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 VPS13CQ709C8 3753 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 H3BRM9 83 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 SMAD7O15105 426 aaKnown RBP12.8□□□□□ -0.36
COL6A1-206ENST00000498614 IL4P05112 153 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 SRSF1Q07955 248 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL6A1-206ENST00000498614 C11orf71Q6IPW1 123 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 OR1N2Q8NGR9 330 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 RNF125Q96EQ8 232 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 MEGF9Q9H1U4 602 aa12.8□□□□□ -0.36
COL6A1-206ENST00000498614 ASH1LQ9NR48 2969 aaKnown RBP12.8□□□□□ -0.36
COL6A1-206ENST00000498614 ODF3BA8MYP8 253 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 H3BUT2 72 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 NDUFA3O95167 84 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 MRPL51Q4U2R6 128 aaKnown RBP12.79□□□□□ -0.36
COL6A1-206ENST00000498614 ORMDL3Q8N138 153 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 NPBQ8NG41 125 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 CSTL1Q9H114 145 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 TMEM189A5PLL7 270 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 SMKR1H3BMG3 65 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 SH2D1AO60880 128 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 PAX8Q06710 450 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 KIR3DS1Q14943 382 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 DYNAPQ8N1N2 210 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 FER1L6-AS1Q8NA97 138 aa12.79□□□□□ -0.36
COL6A1-206ENST00000498614 A1L4Q6 167 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 A6NDN8 102 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 M0R1W7 72 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 PRTN3P24158 256 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 S100A7P31151 101 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 C5orf64Q2M2E5 130 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 AP1S3Q96PC3 154 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 HBDP02042 147 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 PRSS57Q6UWY2 283 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 ADAMTSL5Q6ZMM2 481 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 GTF2H5Q6ZYL4 71 aa12.78□□□□□ -0.36
COL6A1-206ENST00000498614 TENM4Q6N022 2769 aa12.77□□□□□ -0.36
COL6A1-206ENST00000498614 NCBP2LA6PVI3 153 aaKnown RBP12.77□□□□□ -0.36
COL6A1-206ENST00000498614 HSD52Q0P140 79 aa12.77□□□□□ -0.36
COL6A1-206ENST00000498614 VMO1Q7Z5L0 202 aa12.77□□□□□ -0.36
COL6A1-206ENST00000498614 WFDC3Q8IUB2 231 aa12.77□□□□□ -0.36
COL6A1-206ENST00000498614 PCP2Q8IVA1 136 aa12.77□□□□□ -0.36
COL6A1-206ENST00000498614 GNG7O60262 68 aa12.77□□□□□ -0.37
COL6A1-206ENST00000498614 NPYP01303 97 aa12.77□□□□□ -0.37
COL6A1-206ENST00000498614 NDPQ00604 133 aa12.77□□□□□ -0.37
COL6A1-206ENST00000498614 TMEM190Q8WZ59 177 aa12.77□□□□□ -0.37
COL6A1-206ENST00000498614 RAB37Q96AX2 223 aa12.77□□□□□ -0.37
COL6A1-206ENST00000498614 IFI27L1Q96BM0 104 aa12.77□□□□□ -0.37
COL6A1-206ENST00000498614 FANCD2OSQ96PS1 177 aa12.77□□□□□ -0.37
COL6A1-206ENST00000498614 IGKV2-40A0A087WW87 121 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-206ENST00000498614 A0A0G2JLM5 398 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 WI2-2373I1.2A0A1W2PRP0 233 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 K7EP34 96 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 IGKV2D-40P01614 121 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-206ENST00000498614 CENPEQ02224 2701 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 CELSR2Q9HCU4 2923 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 A0A1W2PPR1 153 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 IGHV3-23P01764 117 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 NMUP48645 174 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 RIPPLY3P57055 190 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 OR9G4Q8NGQ1 327 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 ARPC1AQ92747 370 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 AAMDCQ9H7C9 122 aa12.76□□□□□ -0.37
COL6A1-206ENST00000498614 SVEP1Q4LDE5 3571 aa12.75□□□□□ -0.37
COL6A1-206ENST00000498614 NDUFS7O75251 213 aa12.75□□□□□ -0.37
COL6A1-206ENST00000498614 DKK2Q9UBU2 259 aa12.75□□□□□ -0.37
COL6A1-206ENST00000498614 NBPF19A0A087WUL8 3843 aa12.75□□□□□ -0.37
COL6A1-206ENST00000498614 IGLV11-55A0A075B6I3 123 aa12.74□□□□□ -0.37
COL6A1-206ENST00000498614 ZFP36P26651 326 aaKnown RBP12.74□□□□□ -0.37
COL6A1-206ENST00000498614 CKS2P33552 79 aa12.74□□□□□ -0.37
COL6A1-206ENST00000498614 EGR2P11161 476 aaPredicted RBP12.74□□□□□ -0.37
COL6A1-206ENST00000498614 TWIST1Q15672 202 aa12.74□□□□□ -0.37
COL6A1-206ENST00000498614 SIVA1O15304 175 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 MFAP4P55083 255 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 ZNF562Q6V9R5 426 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 OR2K2Q8NGT1 345 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 WNK2Q9Y3S1 2297 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 NPIPB5A8MRT5 1133 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 F8W735 103 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-206ENST00000498614 ZNF80P51504 273 aaPredicted RBP12.73□□□□□ -0.37
COL6A1-206ENST00000498614 PDE6HQ13956 83 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 Q8TAT8 98 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 C18orf15Q96N68 181 aa12.73□□□□□ -0.37
COL6A1-206ENST00000498614 TM4SF20Q53R12 229 aa12.72□□□□□ -0.37
COL6A1-206ENST00000498614 CCDC144NLQ6NUI1 221 aa12.72□□□□□ -0.37
COL6A1-206ENST00000498614 PRR25Q96S07 402 aa12.72□□□□□ -0.37
COL6A1-206ENST00000498614 HELZ2Q9BYK8 2649 aaKnown RBP12.72□□□□□ -0.37
COL6A1-206ENST00000498614 G3V4G9 280 aa12.71□□□□□ -0.37
COL6A1-206ENST00000498614 GAS8-AS1O95177 125 aa12.71□□□□□ -0.37
COL6A1-206ENST00000498614 TMEM11P17152 192 aa12.71□□□□□ -0.37
COL6A1-206ENST00000498614 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
COL6A1-206ENST00000498614 ZNF575Q86XF7 245 aa12.71□□□□□ -0.37
COL6A1-206ENST00000498614 C21orf62Q9NYP8 219 aa12.71□□□□□ -0.37
COL6A1-206ENST00000498614 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.37
COL6A1-206ENST00000498614 MED13LQ71F56 2210 aa12.71□□□□□ -0.38
COL6A1-206ENST00000498614 A0A1W2PPM0 123 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms