RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 PPT1P50897 306 aa14.32□□□□□ -0.12
HLA-DPB1-217ENST00000498038 CST9LP1Q5W188 147 aa14.32□□□□□ -0.12
HLA-DPB1-217ENST00000498038 GOLT1AQ6ZVE7 132 aa14.32□□□□□ -0.12
HLA-DPB1-217ENST00000498038 CSNK1G2-AS1Q8NCQ2 148 aa14.32□□□□□ -0.12
HLA-DPB1-217ENST00000498038 NKX6-2Q9C056 277 aaPredicted RBP14.32□□□□□ -0.12
HLA-DPB1-217ENST00000498038 EPDR1Q9UM22 224 aa14.32□□□□□ -0.12
HLA-DPB1-217ENST00000498038 U3KQK5 164 aa14.32□□□□□ -0.12
HLA-DPB1-217ENST00000498038 TRAV12-2A0A075B6T6 113 aa14.31□□□□□ -0.12
HLA-DPB1-217ENST00000498038 TSPOP30536 169 aa14.31□□□□□ -0.12
HLA-DPB1-217ENST00000498038 BLOC1S1P78537 153 aa14.31□□□□□ -0.12
HLA-DPB1-217ENST00000498038 TCRAP04437 139 aa14.3□□□□□ -0.12
HLA-DPB1-217ENST00000498038 LEPP41159 167 aa14.3□□□□□ -0.12
HLA-DPB1-217ENST00000498038 CDKN1BP46527 198 aa14.3□□□□□ -0.12
HLA-DPB1-217ENST00000498038 ZNF138P52744 262 aa14.3□□□□□ -0.12
HLA-DPB1-217ENST00000498038 TEX261Q6UWH6 196 aa14.3□□□□□ -0.12
HLA-DPB1-217ENST00000498038 OR11H2Q8NH07 326 aa14.3□□□□□ -0.12
HLA-DPB1-217ENST00000498038 IGF2BP2-AS1Q96M15 143 aa14.3□□□□□ -0.12
HLA-DPB1-217ENST00000498038 RARRES2Q99969 163 aa14.3□□□□□ -0.12
HLA-DPB1-217ENST00000498038 GNG13Q9P2W3 67 aa14.3□□□□□ -0.12
HLA-DPB1-217ENST00000498038 J3KRW8 73 aa14.29□□□□□ -0.12
HLA-DPB1-217ENST00000498038 K7EQM0 130 aa14.29□□□□□ -0.12
HLA-DPB1-217ENST00000498038 CRXO43186 299 aaPredicted RBP14.29□□□□□ -0.12
HLA-DPB1-217ENST00000498038 ODF3Q96PU9 254 aa14.29□□□□□ -0.12
HLA-DPB1-217ENST00000498038 ZNF492Q9P255 531 aa14.29□□□□□ -0.12
HLA-DPB1-217ENST00000498038 ARL2-SNX15V9GYD0 113 aa14.29□□□□□ -0.12
HLA-DPB1-217ENST00000498038 IGHV3OR16-12A0A075B7B8 117 aa14.28□□□□□ -0.12
HLA-DPB1-217ENST00000498038 SERTM2A0A1B0GWG4 89 aa14.28□□□□□ -0.12
HLA-DPB1-217ENST00000498038 INSP01308 110 aa14.28□□□□□ -0.12
HLA-DPB1-217ENST00000498038 ATP5G3P48201 142 aa14.28□□□□□ -0.12
HLA-DPB1-217ENST00000498038 Q8TAT8 98 aa14.28□□□□□ -0.12
HLA-DPB1-217ENST00000498038 MANBALQ9NQG1 85 aa14.28□□□□□ -0.12
HLA-DPB1-217ENST00000498038 GOLT1BQ9Y3E0 138 aa14.28□□□□□ -0.12
HLA-DPB1-217ENST00000498038 TRAV8-1A0A0A6YYK1 113 aa14.27□□□□□ -0.13
HLA-DPB1-217ENST00000498038 KIR3DS1Q14943 382 aa14.27□□□□□ -0.13
HLA-DPB1-217ENST00000498038 CCDC28AQ8IWP9 274 aa14.27□□□□□ -0.13
HLA-DPB1-217ENST00000498038 CYB561D1Q8N8Q1 229 aa14.27□□□□□ -0.13
HLA-DPB1-217ENST00000498038 FAM19A4Q96LR4 140 aa14.27□□□□□ -0.13
HLA-DPB1-217ENST00000498038 SGK494Q96LW2 274 aa14.27□□□□□ -0.13
HLA-DPB1-217ENST00000498038 ATG101Q9BSB4 218 aa14.27□□□□□ -0.13
HLA-DPB1-217ENST00000498038 C1orf158Q8N1D5 194 aa14.26□□□□□ -0.13
HLA-DPB1-217ENST00000498038 ZNF680Q8NEM1 530 aa14.26□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TMEM208Q9BTX3 173 aa14.26□□□□□ -0.13
HLA-DPB1-217ENST00000498038 DNAH9Q9NYC9 4486 aa14.26□□□□□ -0.13
HLA-DPB1-217ENST00000498038 C11orf94C9JXX5 98 aa14.25□□□□□ -0.13
HLA-DPB1-217ENST00000498038 F6UZH7 168 aa14.25□□□□□ -0.13
HLA-DPB1-217ENST00000498038 PEX7O00628 323 aa14.25□□□□□ -0.13
HLA-DPB1-217ENST00000498038 IFNA1P01562 189 aa14.25□□□□□ -0.13
HLA-DPB1-217ENST00000498038 GPX1P07203 203 aa14.25□□□□□ -0.13
HLA-DPB1-217ENST00000498038 GFI1BQ5VTD9 330 aa14.25□□□□□ -0.13
HLA-DPB1-217ENST00000498038 ZNF705AQ6ZN79 300 aaPredicted RBP14.25□□□□□ -0.13
HLA-DPB1-217ENST00000498038 HIST1H2BAQ96A08 127 aa14.25□□□□□ -0.13
HLA-DPB1-217ENST00000498038 LINC00479Q96M42 142 aa14.25□□□□□ -0.13
HLA-DPB1-217ENST00000498038 CRISP2P16562 243 aa14.24□□□□□ -0.13
HLA-DPB1-217ENST00000498038 RNASE4P34096 147 aaKnown RBP14.24□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TCEAL7Q9BRU2 100 aa14.24□□□□□ -0.13
HLA-DPB1-217ENST00000498038 PSG8Q9UQ74 426 aa14.24□□□□□ -0.13
HLA-DPB1-217ENST00000498038 X6R8D5 127 aa14.24□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TRAV12-3A0A0B4J271 114 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TRAV34A0A0B4J273 112 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TRBV7-9A0A0J9YWB2 115 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 NMBP08949 121 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 RBMY1A1P0DJD3 496 aaKnown RBP14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 RBMY1CP0DJD4 496 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 FLI1Q01543 452 aaPredicted RBP14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 PMS2P11Q13670 270 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 RBMY1FQ15415 496 aaKnown RBP14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 PRNTQ86SH4 94 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 ZFAND2AQ8N6M9 145 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TMEM75Q8N9X5 138 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 LINC01587Q99440 93 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 LENEPQ9Y5L5 61 aa14.23□□□□□ -0.13
HLA-DPB1-217ENST00000498038 C7orf71A4D174 169 aa14.22□□□□□ -0.13
HLA-DPB1-217ENST00000498038 KLLNB2CW77 178 aa14.22□□□□□ -0.13
HLA-DPB1-217ENST00000498038 IGLV2-11P01706 119 aa14.22□□□□□ -0.13
HLA-DPB1-217ENST00000498038 BTN1A1Q13410 526 aa14.22□□□□□ -0.13
HLA-DPB1-217ENST00000498038 LYPD6BQ8NI32 183 aa14.22□□□□□ -0.13
HLA-DPB1-217ENST00000498038 PCNPQ8WW12 178 aaKnown RBP14.22□□□□□ -0.13
HLA-DPB1-217ENST00000498038 NDFIP1Q9BT67 221 aa14.22□□□□□ -0.13
HLA-DPB1-217ENST00000498038 COL7A1Q02388 2944 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 FBLL1A6NHQ2 334 aaKnown RBP14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 MIFP14174 115 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 PRR9Q5T870 116 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TMEM256Q8N2U0 113 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TVP23CQ96ET8 276 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 NEU1Q99519 415 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 C20orf144Q9BQM9 153 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TXNDC17Q9BRA2 123 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 NIPSNAP3BQ9BS92 247 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 TREM1Q9NP99 234 aa14.21□□□□□ -0.13
HLA-DPB1-217ENST00000498038 NBEAL2Q6ZNJ1 2754 aa14.21□□□□□ -0.14
HLA-DPB1-217ENST00000498038 A0A0J9YWU9 116 aa14.2□□□□□ -0.14
HLA-DPB1-217ENST00000498038 SCO2A0A1W2PP80 73 aa14.2□□□□□ -0.14
HLA-DPB1-217ENST00000498038 SMIM9A6NGZ8 99 aa14.2□□□□□ -0.14
HLA-DPB1-217ENST00000498038 DEFB4AO15263 64 aa14.2□□□□□ -0.14
HLA-DPB1-217ENST00000498038 BCL2P10415 239 aa14.2□□□□□ -0.14
HLA-DPB1-217ENST00000498038 HTN1P15515 57 aa14.2□□□□□ -0.14
HLA-DPB1-217ENST00000498038 UBE2G1P62253 170 aa14.2□□□□□ -0.14
HLA-DPB1-217ENST00000498038 VAX2Q9UIW0 290 aa14.2□□□□□ -0.14
HLA-DPB1-217ENST00000498038 HUWE1Q7Z6Z7 4374 aaKnown RBP14.19□□□□□ -0.14
HLA-DPB1-217ENST00000498038 IGHV4-28A0A0C4DH34 117 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms