RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 FAM107AO95990 144 aa0.65□□□□□ -2.31
PHC3-216ENST00000497171 IFNA21P01568 189 aa0.65□□□□□ -2.31
PHC3-216ENST00000497171 IGHV3-33P01772 117 aa0.65□□□□□ -2.31
PHC3-216ENST00000497171 MAXP61244 160 aa0.65□□□□□ -2.31
PHC3-216ENST00000497171 Q6ZQY7 126 aa0.65□□□□□ -2.31
PHC3-216ENST00000497171 LINC00269Q8N2A0 174 aa0.65□□□□□ -2.31
PHC3-216ENST00000497171 RMND5BQ96G75 393 aaPredicted RBP0.65□□□□□ -2.31
PHC3-216ENST00000497171 FREM3P0C091 2139 aa0.65□□□□□ -2.31
PHC3-216ENST00000497171 FBN2P35556 2912 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 TRAV13-1A0A0B4J241 112 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 BBIP1A8MTZ0 92 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 PGRMC1O00264 195 aaKnown RBP0.64□□□□□ -2.31
PHC3-216ENST00000497171 S100GP29377 79 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 RPL37AP61513 92 aaKnown RBP0.64□□□□□ -2.31
PHC3-216ENST00000497171 SAMD13Q5VXD3 122 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 SMIM15Q7Z3B0 74 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 C5orf17Q8NAS9 161 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 MED31Q9Y3C7 131 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 ANKRD31Q8N7Z5 1873 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 NUP210Q8TEM1 1887 aaPredicted RBP0.64□□□□□ -2.31
PHC3-216ENST00000497171 PTPRDP23468 1912 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 DLC1Q96QB1 1528 aa0.64□□□□□ -2.31
PHC3-216ENST00000497171 NOTCH1P46531 2555 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 MED12Q93074 2177 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 PBRM1Q86U86 1689 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 H3BMG7 143 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 SULT1C4O75897 302 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 SPINT3P49223 89 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 C3orf62Q6ZUJ4 267 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 CCL4L1Q8NHW4 92 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 THEM6Q8WUY1 208 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 CIB3Q96Q77 187 aaPredicted RBP0.63□□□□□ -2.31
PHC3-216ENST00000497171 CENPHQ9H3R5 247 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 FANCMQ8IYD8 2048 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 BCL9O00512 1426 aa0.63□□□□□ -2.31
PHC3-216ENST00000497171 TET1Q8NFU7 2136 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.62□□□□□ -2.31
PHC3-216ENST00000497171 A0A0J9YY99 117 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 TRBV27A0A0K0K1C4 114 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 LOC107986453A0A1B0GWG9 222 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 M0QZK8 103 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 SAA1P0DJI8 122 aaPredicted RBP0.62□□□□□ -2.31
PHC3-216ENST00000497171 RPL7P18124 248 aaKnown RBP0.62□□□□□ -2.31
PHC3-216ENST00000497171 CRYGSP22914 178 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 KDELR1P24390 212 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 SPINK9Q5DT21 86 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.62□□□□□ -2.31
PHC3-216ENST00000497171 BRK1Q8WUW1 75 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 LPAR5Q9H1C0 372 aa0.62□□□□□ -2.31
PHC3-216ENST00000497171 ARL5CA6NH57 179 aa0.61□□□□□ -2.31
PHC3-216ENST00000497171 PDE6GP18545 87 aa0.61□□□□□ -2.31
PHC3-216ENST00000497171 POLR2HP52434 150 aaKnown RBP0.61□□□□□ -2.31
PHC3-216ENST00000497171 SNRPD3P62318 126 aaKnown RBP0.61□□□□□ -2.31
PHC3-216ENST00000497171 TFAMQ00059 246 aaKnown RBP0.61□□□□□ -2.31
PHC3-216ENST00000497171 TMEM128Q5BJH2 165 aa0.61□□□□□ -2.31
PHC3-216ENST00000497171 SPATA8Q6RVD6 105 aa0.61□□□□□ -2.31
PHC3-216ENST00000497171 TMEM229BQ8NBD8 167 aa0.61□□□□□ -2.31
PHC3-216ENST00000497171 TMEM35BQ8NCS4 154 aa0.61□□□□□ -2.31
PHC3-216ENST00000497171 CCL19Q99731 98 aa0.61□□□□□ -2.31
PHC3-216ENST00000497171 NABP2Q9BQ15 211 aa0.61□□□□□ -2.31
PHC3-216ENST00000497171 SMPXQ9UHP9 88 aa0.61□□□□□ -2.31
PHC3-216ENST00000497171 TCOF1Q13428 1488 aaKnown RBP0.61□□□□□ -2.31
PHC3-216ENST00000497171 LOC107984640A0A0U1RRK4 108 aa0.6□□□□□ -2.31
PHC3-216ENST00000497171 A0A1W2PPB8 328 aa0.6□□□□□ -2.31
PHC3-216ENST00000497171 A0A1W2PRS3 328 aa0.6□□□□□ -2.31
PHC3-216ENST00000497171 KIR3DP1A8MWS1 328 aa0.6□□□□□ -2.31
PHC3-216ENST00000497171 EDF1O60869 148 aaKnown RBP0.6□□□□□ -2.31
PHC3-216ENST00000497171 RPS3P23396 243 aaKnown RBP eCLIP0.6□□□□□ -2.31
PHC3-216ENST00000497171 SRP9P49458 86 aaKnown RBP0.6□□□□□ -2.31
PHC3-216ENST00000497171 GTF2A1P52655 376 aaPredicted RBP0.6□□□□□ -2.31
PHC3-216ENST00000497171 FOXA3P55318 350 aaPredicted RBP0.6□□□□□ -2.31
PHC3-216ENST00000497171 LSM3P62310 102 aaKnown RBP0.6□□□□□ -2.31
PHC3-216ENST00000497171 C6orf52Q5T4I8 152 aa0.6□□□□□ -2.31
PHC3-216ENST00000497171 MORN4Q8NDC4 146 aa0.6□□□□□ -2.31
PHC3-216ENST00000497171 OR51A4Q8NGJ6 313 aa0.6□□□□□ -2.31
PHC3-216ENST00000497171 OR9Q1Q8NGQ5 310 aa0.6□□□□□ -2.31
PHC3-216ENST00000497171 CBLN4Q9NTU7 201 aa0.6□□□□□ -2.31
PHC3-216ENST00000497171 ZCCHC11Q5TAX3 1644 aaKnown RBP0.6□□□□□ -2.31
PHC3-216ENST00000497171 ASCC3Q8N3C0 2202 aaKnown RBP0.6□□□□□ -2.31
PHC3-216ENST00000497171 FGD6Q6ZV73 1430 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 TRBV7-6A0A0J9YX20 115 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 TSTD3H0UI37 97 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 K7EIL1 84 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 SLC25A4P12235 298 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 DNAJB13P59910 316 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 BLCAPP62952 87 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 QRFPP83859 136 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 CSAG1Q6PB30 78 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 C10orf111Q8N326 155 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 TCTEX1D1Q8N7M0 179 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 CCDC115Q96NT0 180 aa0.59□□□□□ -2.31
PHC3-216ENST00000497171 ZGRF1Q86YA3 2104 aa0.59□□□□□ -2.32
PHC3-216ENST00000497171 A2MP01023 1474 aa0.59□□□□□ -2.32
PHC3-216ENST00000497171 ZFC3H1O60293 1989 aaKnown RBP0.59□□□□□ -2.32
PHC3-216ENST00000497171 FAM135BQ49AJ0 1406 aa0.58□□□□□ -2.32
PHC3-216ENST00000497171 H0YJX3 145 aa0.58□□□□□ -2.32
PHC3-216ENST00000497171 GYPBP06028 91 aa0.58□□□□□ -2.32
PHC3-216ENST00000497171 ETV6P41212 452 aa0.58□□□□□ -2.32
PHC3-216ENST00000497171 ZNF137PP52743 207 aa0.58□□□□□ -2.32
PHC3-216ENST00000497171 FXYD6P3P58550 94 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms