RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 LTBP1Q14766 1721 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 DDX60LQ5H9U9 1706 aaKnown RBP2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 CASP8AP2Q9UKL3 1982 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 IGHV3OR15-7A0A075B7D8 119 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 IGKV1D-13A0A0B4J2D9 117 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 UPK2O00526 184 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 NPYP01303 97 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 IGKV1-13P0DP09 117 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 CXCL8P10145 99 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 ZFP2Q6ZN57 461 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 Q8N9P0 234 aaPredicted RBP2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 VSIG2Q96IQ7 327 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 CCL13Q99616 98 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 CYSTM1Q9H1C7 97 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 Q9H3A6 140 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 IL36RNQ9UBH0 155 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 KLK13Q9UKR3 277 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 V9GY05 133 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 ATG2BQ96BY7 2078 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 POLEQ07864 2286 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 IGKV1D-43A0A0B4J1Z2 117 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 COX7A2LO14548 114 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 SLC25A20O43772 301 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 CDK2AP2O75956 126 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 FAM104BQ5XKR9 115 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 PHF5AQ7RTV0 110 aaKnown RBP2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 Q8N2B8 174 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 CD177Q8N6Q3 437 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF492Q9P255 531 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 LINC00588Q9Y4M8 146 aa2.33□□□□□ -2.04
SNRNP48-202ENST00000496946 DLG5Q8TDM6 1919 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 NUMA1Q14980 2115 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 NLRC5Q86WI3 1866 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 TMSB15BA0A087X1C1 80 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 MYMXA0A1B0GTQ4 84 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 LOC389332A0A1B0GUA5 103 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 H3BVH4 76 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 RNASE2P10153 161 aaKnown RBP2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 UBE2D3P61077 147 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 UBE2D2P62837 147 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF117Q03924 483 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 RPL18Q07020 188 aaKnown RBP2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF678Q5SXM1 525 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 Q8N8P6 123 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 DOCK9Q9BZ29 2069 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 PAPPAQ13219 1627 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 A0A1W2PQD3 144 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 EPOPA6NHQ4 379 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 KRTAP29-1A8MX34 341 aaPredicted RBP2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 H3BMM0 161 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 CCKP06307 115 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 MGST1P10620 155 aaKnown RBP2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 SMIM11AP58511 58 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 LINC00313P59037 77 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 UBE2BP63146 152 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 C9orf57Q5W0N0 161 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 Q6ZSV7 163 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 PDPNQ86YL7 162 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 LINC00337Q8N6G1 96 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 LINC01555Q8NAE3 123 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
SNRNP48-202ENST00000496946 BAZ2BQ9UIF8 2168 aaKnown RBP2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 ARID2Q68CP9 1835 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 CRYM-AS1A6NIL9 109 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 KLLNB2CW77 178 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 LY75O60449 1722 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 NXPH4O95158 308 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 LMO2P25791 158 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 DYNLT3P51808 116 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 KRTAP10-11P60412 298 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 DYNLT1P63172 113 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF876PQ49A33 203 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 DEFB121Q5J5C9 76 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 NKAPP1Q8N9T2 125 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 C11orf72Q8NBR9 251 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 NUP37Q8NFH4 326 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 SPTSSAQ969W0 71 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 ATXN7L3BQ96GX2 97 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 SLC25A2Q9BXI2 301 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 PLXNA1Q9UIW2 1896 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 ZNF236Q9UL36 1845 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 LOC285556D6RIA3 1793 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 NOTCH4Q99466 2003 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 KMT2EQ8IZD2 1858 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 KIAA1549Q9HCM3 1950 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 IGHV3OR16-9A0A0B4J2B5 98 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 LOC107984156A0A0G2JMH3 177 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 C19orf71A6NCJ1 209 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 C16orf97H3BN30 126 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 FSTL3O95633 263 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 PEBP1P30086 187 aaKnown RBP2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 MFAP2P55001 183 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 FXYD6P3P58550 94 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 RBM3P98179 157 aaKnown RBP2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 LCE1AQ5T7P2 110 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 PRNTQ86SH4 94 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 ARL17AQ8IVW1 177 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 C9orf106Q8NAJ2 232 aa2.31□□□□□ -2.04
SNRNP48-202ENST00000496946 C18orf12Q96KH6 178 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms