RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 NHLRC2Q8NBF2 726 aa10.51□□□□□ -0.73
TFE3-205ENST00000495940 NUP35Q8NFH5 326 aa10.51□□□□□ -0.73
TFE3-205ENST00000495940 SRSF12Q8WXF0 261 aaKnown RBP10.51□□□□□ -0.73
TFE3-205ENST00000495940 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
TFE3-205ENST00000495940 RASL11BQ9BPW5 248 aa10.51□□□□□ -0.73
TFE3-205ENST00000495940 NRN1Q9NPD7 142 aa10.51□□□□□ -0.73
TFE3-205ENST00000495940 DPM3Q9P2X0 92 aa10.51□□□□□ -0.73
TFE3-205ENST00000495940 TSSC4Q9Y5U2 329 aaPredicted RBP10.51□□□□□ -0.73
TFE3-205ENST00000495940 C19orf71A6NCJ1 209 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 A6NDX4 124 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 TEX22C9J3V5 150 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 DIRC3C9JPN6 131 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 NPIPB6E9PJ23 425 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 I3L2K1 104 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 IGLC1P0CG04 106 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 FXYD3Q14802 87 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 C10orf55Q5SWW7 151 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 RBPMS2Q6ZRY4 209 aaKnown RBP10.5□□□□□ -0.73
TFE3-205ENST00000495940 LHFPL4Q7Z7J7 247 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 TMEM75Q8N9X5 138 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 PRR25Q96S07 402 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 Q9H3A6 140 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 THYN1Q9P016 225 aa10.5□□□□□ -0.73
TFE3-205ENST00000495940 NDUFA3O95167 84 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 COX7A1P24310 79 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 DIAPH2-AS1Q14236 149 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 MINOS1Q5TGZ0 78 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 MORN5Q5VZ52 161 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 MRPL54Q6P161 138 aaKnown RBP10.49□□□□□ -0.73
TFE3-205ENST00000495940 C18orf32Q8TCD1 76 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 SHANK2-AS3Q9BTD1 123 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 UQCR10Q9UDW1 63 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 MINOS1-NBL1R4GNA1 71 aa10.49□□□□□ -0.73
TFE3-205ENST00000495940 NPIPB5A8MRT5 1133 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 HIGD1CA8MV81 97 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 NBR2O15453 112 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 HSBP1O75506 76 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 MOSP00540 346 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 PLGLAQ15195 96 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 GATD1Q8NB37 220 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 RCHY1Q96PM5 261 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 NEU1Q99519 415 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 TXN2Q99757 166 aa10.48□□□□□ -0.73
TFE3-205ENST00000495940 ALKBH7Q9BT30 221 aaPredicted RBP10.48□□□□□ -0.73
TFE3-205ENST00000495940 SLC25A39Q9BZJ4 359 aaPredicted RBP10.48□□□□□ -0.73
TFE3-205ENST00000495940 PCLOQ9Y6V0 5065 aa10.47□□□□□ -0.73
TFE3-205ENST00000495940 A0A1B0GV90 55 aa10.47□□□□□ -0.73
TFE3-205ENST00000495940 CNIH1O95406 144 aa10.47□□□□□ -0.73
TFE3-205ENST00000495940 PSG1P11464 419 aa10.47□□□□□ -0.73
TFE3-205ENST00000495940 RAB9AP51151 201 aa10.47□□□□□ -0.73
TFE3-205ENST00000495940 TCL1AP56279 114 aa10.47□□□□□ -0.73
TFE3-205ENST00000495940 SSBP2P81877 361 aaPredicted RBP10.47□□□□□ -0.73
TFE3-205ENST00000495940 C16orf54Q6UWD8 224 aa10.47□□□□□ -0.73
TFE3-205ENST00000495940 VN1R17PQ8TDU5 208 aa10.47□□□□□ -0.73
TFE3-205ENST00000495940 FRAS1Q86XX4 4008 aa10.46□□□□□ -0.73
TFE3-205ENST00000495940 H3BRN7 92 aa10.46□□□□□ -0.73
TFE3-205ENST00000495940 FCGR2BP31994 310 aaPredicted RBP10.46□□□□□ -0.73
TFE3-205ENST00000495940 KRTDAPP60985 99 aa10.46□□□□□ -0.73
TFE3-205ENST00000495940 PSG9Q00887 426 aa10.46□□□□□ -0.73
TFE3-205ENST00000495940 RIGQ13278 110 aa10.46□□□□□ -0.73
TFE3-205ENST00000495940 Q86TA4 180 aa10.46□□□□□ -0.73
TFE3-205ENST00000495940 SNHG12Q9BXW3 62 aa10.46□□□□□ -0.73
TFE3-205ENST00000495940 TPSG1Q9NRR2 321 aa10.46□□□□□ -0.73
TFE3-205ENST00000495940 MRPL36Q9P0J6 103 aaKnown RBP10.46□□□□□ -0.73
TFE3-205ENST00000495940 FBXL7Q9UJT9 491 aa10.46□□□□□ -0.73
TFE3-205ENST00000495940 PLECQ15149 4684 aaKnown RBP10.45□□□□□ -0.74
TFE3-205ENST00000495940 ODF3BA8MYP8 253 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 TCAPO15273 167 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 RPLP1P05386 114 aaKnown RBP10.45□□□□□ -0.74
TFE3-205ENST00000495940 BTF3P20290 206 aaKnown RBP10.45□□□□□ -0.74
TFE3-205ENST00000495940 MFAP4P55083 255 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 LYZP61626 148 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 GAGE1Q13065 139 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 EBI3Q14213 229 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 LDLRAD2Q5SZI1 272 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 ZNF562Q6V9R5 426 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 ZNF705AQ6ZN79 300 aaPredicted RBP10.45□□□□□ -0.74
TFE3-205ENST00000495940 C18orf65Q6ZTR6 163 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 COX8CQ7Z4L0 72 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 BLNKQ8WV28 456 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 RITA1Q96K30 269 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 FBXL15Q9H469 300 aa10.45□□□□□ -0.74
TFE3-205ENST00000495940 TRBV19A0A075B6N1 114 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 TRAV34A0A0B4J273 112 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 CRXO43186 299 aaPredicted RBP10.44□□□□□ -0.74
TFE3-205ENST00000495940 CTRLP40313 264 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 CSN1S1P47710 185 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 RPS20P60866 119 aaKnown RBP10.44□□□□□ -0.74
TFE3-205ENST00000495940 SLAQ13239 276 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 KLK9Q2XQG4 91 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 NIT1Q86X76 327 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 TTC9CQ8N5M4 171 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 OR4X2Q8NGF9 303 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 LINC00479Q96M42 142 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 AAMDCQ9H7C9 122 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
TFE3-205ENST00000495940 IGHV3-72A0A0B4J1Y9 119 aa10.43□□□□□ -0.74
TFE3-205ENST00000495940 K7EIM0 57 aa10.43□□□□□ -0.74
TFE3-205ENST00000495940 M0R2Z0 102 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms