RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 GPX1P07203 203 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 ELANEP08246 267 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 OR5AL1P0C617 328 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 ID1P41134 155 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 ZNF138P52744 262 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 Q5PR19 223 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 ZNF493Q6ZR52 646 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 TCF24Q7RTU0 167 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 TMEM86BQ8N661 226 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 OR10J6PQ8NGY7 276 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 GLMPQ8WWB7 406 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 LINC00477Q96M19 166 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 ALKBH7Q9BT30 221 aaPredicted RBP6.61□□□□□ -1.35
EPHA4-213ENST00000495693 PEF1Q9UBV8 284 aaKnown RBP6.61□□□□□ -1.35
EPHA4-213ENST00000495693 NAGKQ9UJ70 344 aa6.61□□□□□ -1.35
EPHA4-213ENST00000495693 CACNA1AO00555 2505 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 C20orf202A1L168 122 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 CLPSL1A2RUU4 121 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 PRB1P04280 392 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 RNF224P0DH78 156 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 DEFA6Q01524 100 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 CFHR3Q02985 330 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 SLAQ13239 276 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 PMCHL1Q16048 86 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 LBHQ53QV2 105 aaPredicted RBP6.6□□□□□ -1.35
EPHA4-213ENST00000495693 Q6YL49 198 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 C9orf47Q6ZRZ4 202 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 SMIM15Q7Z3B0 74 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 GPHB5Q86YW7 130 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 TMEM256Q8N2U0 113 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 OR4X2Q8NGF9 303 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 C18orf32Q8TCD1 76 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 GTSF1Q8WW33 167 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 BBC3Q96PG8 261 aaPredicted RBP6.6□□□□□ -1.35
EPHA4-213ENST00000495693 PRDM13Q9H4Q3 707 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 LAMTOR2Q9Y2Q5 125 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 SMAD5-AS1Q9Y6J3 95 aa6.6□□□□□ -1.35
EPHA4-213ENST00000495693 ADGRG4Q8IZF6 3080 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 IGKV2-40A0A087WW87 121 aaPredicted RBP6.59□□□□□ -1.35
EPHA4-213ENST00000495693 LOC102724200A0A096LPH7 203 aaPredicted RBP6.59□□□□□ -1.35
EPHA4-213ENST00000495693 LINC01548A6NM66 108 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 SH2D1AO60880 128 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 FSHBP01225 129 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 IGKV2D-40P01614 121 aaPredicted RBP6.59□□□□□ -1.35
EPHA4-213ENST00000495693 PPBPP02775 128 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 IGHV4-31P0DP07 118 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 CTRLP40313 264 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 CACNG7P62955 275 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 DEFB112Q30KQ8 113 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 LINC00322Q6ZN03 302 aaPredicted RBP6.59□□□□□ -1.35
EPHA4-213ENST00000495693 MRPL52Q86TS9 123 aaKnown RBP6.59□□□□□ -1.35
EPHA4-213ENST00000495693 FER1L6-AS1Q8NA97 138 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 NRN1Q9NPD7 142 aa6.59□□□□□ -1.35
EPHA4-213ENST00000495693 TPRP12270 2363 aaKnown RBP6.59□□□□□ -1.35
EPHA4-213ENST00000495693 PLXNB1O43157 2135 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 ARHGAP32A7KAX9 2087 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 IGHV3-35A0A0C4DH35 117 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 IGHV7-4-1A0A0J9YVY3 117 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 A1L4Q6 167 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 ZNF705FA8MVS1 300 aaPredicted RBP6.58□□□□□ -1.36
EPHA4-213ENST00000495693 M0QZ24 198 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 M0R2Z0 102 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 APOHP02749 345 aaPredicted RBP6.58□□□□□ -1.36
EPHA4-213ENST00000495693 ZNF705DP0CH99 300 aaPredicted RBP6.58□□□□□ -1.36
EPHA4-213ENST00000495693 ZNF705BP0CI00 300 aaPredicted RBP6.58□□□□□ -1.36
EPHA4-213ENST00000495693 PSMB8P28062 276 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 KIAA1644Q3SXP7 199 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 ZNF738Q8NE65 137 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 CNFNQ9BYD5 112 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 HSPB8Q9UJY1 196 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 TP53TG3Q9ULZ0 132 aa6.58□□□□□ -1.36
EPHA4-213ENST00000495693 PIEZO1Q92508 2521 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 TRAV21A0A0B4J279 112 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 LGALS9O00182 355 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 IGHV4-59P01825 116 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 ORM1P02763 201 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 DDTP30046 118 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 BLCAPP62952 87 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 RNASEKQ6P5S7 137 aaKnown RBP6.57□□□□□ -1.36
EPHA4-213ENST00000495693 ORMDL3Q8N138 153 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 KLHDC1Q8N7A1 406 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 UBE2E2Q96LR5 201 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 VAMP8Q9BV40 100 aa6.57□□□□□ -1.36
EPHA4-213ENST00000495693 LGALS1P09382 135 aaKnown RBP6.56□□□□□ -1.36
EPHA4-213ENST00000495693 ARMS2P0C7Q2 107 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 LINC00614P0C842 121 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 IGLC6P0CF74 106 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 BTF3P20290 206 aaKnown RBP6.56□□□□□ -1.36
EPHA4-213ENST00000495693 NTF3P20783 257 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 CRIP1P50238 77 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 SNRPD3P62318 126 aaKnown RBP6.56□□□□□ -1.36
EPHA4-213ENST00000495693 SRSF1Q07955 248 aaKnown RBP eCLIP6.56□□□□□ -1.36
EPHA4-213ENST00000495693 TEX43Q6ZNM6 134 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 IL17RELQ6ZVW7 336 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 FA2HQ7L5A8 372 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 RAX2Q96IS3 184 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 Q96MF0 132 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 ODF3Q96PU9 254 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 VGLL1Q99990 258 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms