RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 AMMECR1LQ6DCA0 310 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 RNF182Q8N6D2 247 aa10.11□□□□□ -0.79
PTPN7-217ENST00000495688 NBL1P41271 181 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 ADORA2A-AS1P86434 159 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 NHLH1Q02575 133 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 FBXL19-AS1Q494R0 122 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 Q8N6K4 173 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 ZNF48Q96MX3 618 aaPredicted RBP10.1□□□□□ -0.79
PTPN7-217ENST00000495688 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 CELSR2Q9HCU4 2923 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 ORM1P02763 201 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 TMEM11P17152 192 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 SAPCD1Q5SSQ6 148 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 THYN1Q9P016 225 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 FGF6P10767 208 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 PAX8Q06710 450 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 SELENOKQ9Y6D0 94 aa10.1□□□□□ -0.79
PTPN7-217ENST00000495688 ECSCRQ19T08 205 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 C11orf71Q6IPW1 123 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 PRSS57Q6UWY2 283 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 S100A7AQ86SG5 101 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 MSRB2Q9Y3D2 182 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 ITPR1Q14643 2758 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 TRAV8-6A0A0B4J262 113 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 UQCRFS1P47985 274 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 C15orf32Q32M92 178 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 C18orf15Q96N68 181 aa10.09□□□□□ -0.79
PTPN7-217ENST00000495688 IGHV3-49A0A0A0MS15 119 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 A0A1W2PPR1 153 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 K7EP13 123 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 HBDP02042 147 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 CRYBG3Q68DQ2 2970 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 COX8CQ7Z4L0 72 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 Q8N9W7 124 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 TMEM238LA0A1B0GVL6 79 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 LINC01548A6NM66 108 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 CLEC3BP05452 202 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 GATA1P15976 413 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-217ENST00000495688 CCDC144NLQ6NUI1 221 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 TMEM190Q8WZ59 177 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 DKK2Q9UBU2 259 aa10.08□□□□□ -0.8
PTPN7-217ENST00000495688 EVI2AP22794 236 aa10.07□□□□□ -0.8
PTPN7-217ENST00000495688 RNF185Q96GF1 192 aa10.07□□□□□ -0.8
PTPN7-217ENST00000495688 PSMG3-AS1Q96PY0 264 aa10.07□□□□□ -0.8
PTPN7-217ENST00000495688 CD5LO43866 347 aa10.07□□□□□ -0.8
PTPN7-217ENST00000495688 IL17RELQ6ZVW7 336 aa10.07□□□□□ -0.8
PTPN7-217ENST00000495688 IFI27L1Q96BM0 104 aa10.07□□□□□ -0.8
PTPN7-217ENST00000495688 C7orf71A4D174 169 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 G3V318 75 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 ZNF207O43670 478 aaKnown RBP10.06□□□□□ -0.8
PTPN7-217ENST00000495688 BMI1P35226 326 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 LGALS9CQ6DKI2 356 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 PCP2Q8IVA1 136 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 ATP6V0E1O15342 81 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 EBI3Q14213 229 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 RNF151Q2KHN1 245 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 Q6ZQT7 251 aa10.06□□□□□ -0.8
PTPN7-217ENST00000495688 NAA38Q9BRA0 125 aaKnown RBP10.06□□□□□ -0.8
PTPN7-217ENST00000495688 BUB3O43684 328 aa10.05□□□□□ -0.8
PTPN7-217ENST00000495688 ZFAND3Q9H8U3 227 aa10.05□□□□□ -0.8
PTPN7-217ENST00000495688 FABP5P3A8MUU1 101 aa10.05□□□□□ -0.8
PTPN7-217ENST00000495688 NMUP48645 174 aa10.05□□□□□ -0.8
PTPN7-217ENST00000495688 CLEC19AQ6UXS0 136 aa10.05□□□□□ -0.8
PTPN7-217ENST00000495688 ZNF502Q8TBZ5 544 aa10.05□□□□□ -0.8
PTPN7-217ENST00000495688 C11orf21Q9P2W6 132 aa10.05□□□□□ -0.8
PTPN7-217ENST00000495688 AJUBAQ96IF1 538 aa10.04□□□□□ -0.8
PTPN7-217ENST00000495688 SIRPDQ9H106 197 aa10.04□□□□□ -0.8
PTPN7-217ENST00000495688 CLPSL1A2RUU4 121 aa10.04□□□□□ -0.8
PTPN7-217ENST00000495688 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.04□□□□□ -0.8
PTPN7-217ENST00000495688 BOD1L2Q8IYS8 172 aa10.04□□□□□ -0.8
PTPN7-217ENST00000495688 CCDC140Q96MF4 163 aa10.04□□□□□ -0.8
PTPN7-217ENST00000495688 IGKV3D-20A0A0C4DH25 116 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 RPS20P60866 119 aaKnown RBP10.03□□□□□ -0.8
PTPN7-217ENST00000495688 TTTY13Q9BZ97 58 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 TRGV3P03979 118 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 SAA4P35542 130 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 LEPP41159 167 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 MINOS1Q5TGZ0 78 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 C1orf122Q6ZSJ8 110 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 CST9LQ9H4G1 147 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 RAXQ9Y2V3 346 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 MINOS1-NBL1R4GNA1 71 aa10.03□□□□□ -0.8
PTPN7-217ENST00000495688 SMAD7O15105 426 aaKnown RBP10.02□□□□□ -0.8
PTPN7-217ENST00000495688 TNFRSF6BO95407 300 aa10.02□□□□□ -0.8
PTPN7-217ENST00000495688 FAM110DQ8TAY7 271 aaPredicted RBP10.02□□□□□ -0.8
PTPN7-217ENST00000495688 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.8
PTPN7-217ENST00000495688 CSMD2Q7Z408 3487 aa10.02□□□□□ -0.81
PTPN7-217ENST00000495688 TM4SF20Q53R12 229 aa10.02□□□□□ -0.81
PTPN7-217ENST00000495688 CNFNQ9BYD5 112 aa10.02□□□□□ -0.81
PTPN7-217ENST00000495688 MAP1LC3AQ9H492 121 aa10.02□□□□□ -0.81
PTPN7-217ENST00000495688 IGKV2D-26A0A0A0MRZ7 120 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 OOSP1A8MZH6 123 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 SCGB2A1O75556 95 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 DTX2Q86UW9 622 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 DPF1Q92782 380 aa10.01□□□□□ -0.81
PTPN7-217ENST00000495688 PEF1Q9UBV8 284 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms