RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 RNF24Q9Y225 148 aa14.37□□□□□ -0.11
TSPAN4-212ENST00000494815 IGHV4-59P01825 116 aa14.37□□□□□ -0.11
TSPAN4-212ENST00000494815 SPATA12Q7Z6I5 190 aa14.37□□□□□ -0.11
TSPAN4-212ENST00000494815 BPIFA4PQ86YQ2 179 aa14.37□□□□□ -0.11
TSPAN4-212ENST00000494815 TMEM190Q8WZ59 177 aa14.37□□□□□ -0.11
TSPAN4-212ENST00000494815 SMIM12Q96EX1 92 aa14.37□□□□□ -0.11
TSPAN4-212ENST00000494815 URB1-AS1Q96HZ7 61 aa14.37□□□□□ -0.11
TSPAN4-212ENST00000494815 GPR183P32249 361 aa14.36□□□□□ -0.11
TSPAN4-212ENST00000494815 BLCAPP62952 87 aa14.36□□□□□ -0.11
TSPAN4-212ENST00000494815 BLNKQ8WV28 456 aa14.36□□□□□ -0.11
TSPAN4-212ENST00000494815 CCDC140Q96MF4 163 aa14.36□□□□□ -0.11
TSPAN4-212ENST00000494815 CST9LQ9H4G1 147 aa14.36□□□□□ -0.11
TSPAN4-212ENST00000494815 CLEC3BP05452 202 aa14.36□□□□□ -0.11
TSPAN4-212ENST00000494815 PPIFP30405 207 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-212ENST00000494815 ATP5G2Q06055 141 aa14.36□□□□□ -0.11
TSPAN4-212ENST00000494815 LINC00527Q9UJ94 153 aa14.36□□□□□ -0.11
TSPAN4-212ENST00000494815 NBPF19A0A087WUL8 3843 aa14.35□□□□□ -0.11
TSPAN4-212ENST00000494815 CRXO43186 299 aaPredicted RBP14.35□□□□□ -0.11
TSPAN4-212ENST00000494815 GNG5P63218 68 aa14.35□□□□□ -0.11
TSPAN4-212ENST00000494815 HBBP68871 147 aa14.35□□□□□ -0.11
TSPAN4-212ENST00000494815 WFDC11Q8NEX6 87 aa14.35□□□□□ -0.11
TSPAN4-212ENST00000494815 CLEC5AQ9NY25 188 aa14.35□□□□□ -0.11
TSPAN4-212ENST00000494815 CLUHP3Q96NS8 147 aa14.34□□□□□ -0.11
TSPAN4-212ENST00000494815 EPDR1Q9UM22 224 aa14.34□□□□□ -0.11
TSPAN4-212ENST00000494815 OR4C46A6NHA9 309 aa14.34□□□□□ -0.11
TSPAN4-212ENST00000494815 RPS20P60866 119 aaKnown RBP14.34□□□□□ -0.11
TSPAN4-212ENST00000494815 ST20Q9HBF5 79 aa14.34□□□□□ -0.11
TSPAN4-212ENST00000494815 KLF12Q9Y4X4 402 aa14.34□□□□□ -0.11
TSPAN4-212ENST00000494815 TRGV3P03979 118 aa14.33□□□□□ -0.11
TSPAN4-212ENST00000494815 CLEC19AQ6UXS0 136 aa14.33□□□□□ -0.11
TSPAN4-212ENST00000494815 Q6YL49 198 aa14.33□□□□□ -0.11
TSPAN4-212ENST00000494815 CHCHD1Q96BP2 118 aaKnown RBP14.33□□□□□ -0.11
TSPAN4-212ENST00000494815 RPP21Q9H633 154 aaKnown RBP14.33□□□□□ -0.11
TSPAN4-212ENST00000494815 SLC25A5P05141 298 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-212ENST00000494815 CT83Q5H943 113 aa14.33□□□□□ -0.12
TSPAN4-212ENST00000494815 TCF24Q7RTU0 167 aa14.33□□□□□ -0.12
TSPAN4-212ENST00000494815 TEX29Q8N6K0 151 aa14.33□□□□□ -0.12
TSPAN4-212ENST00000494815 C5orf17Q8NAS9 161 aa14.33□□□□□ -0.12
TSPAN4-212ENST00000494815 GPR82Q96P67 336 aa14.33□□□□□ -0.12
TSPAN4-212ENST00000494815 RABAC1Q9UI14 185 aa14.33□□□□□ -0.12
TSPAN4-212ENST00000494815 VPREB3Q9UKI3 123 aa14.33□□□□□ -0.12
TSPAN4-212ENST00000494815 ZFHX3Q15911 3703 aa14.33□□□□□ -0.12
TSPAN4-212ENST00000494815 PGPA6NDG6 321 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 MRPS12O15235 138 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 USMG5Q96IX5 58 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 MLST8Q9BVC4 326 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 PRSS22Q9GZN4 317 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 Q9H3A6 140 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 OTORQ9NRC9 128 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 CCDC168Q8NDH2 2452 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 ITPR3Q14573 2671 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 Q6ZS46 218 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 ZNF414Q96IQ9 312 aa14.32□□□□□ -0.12
TSPAN4-212ENST00000494815 TRBV19A0A075B6N1 114 aa14.31□□□□□ -0.12
TSPAN4-212ENST00000494815 IGHV1-24A0A0C4DH33 117 aa14.31□□□□□ -0.12
TSPAN4-212ENST00000494815 A8MWL6 223 aa14.31□□□□□ -0.12
TSPAN4-212ENST00000494815 SYS1-DBNDD2H3BUS1 97 aa14.31□□□□□ -0.12
TSPAN4-212ENST00000494815 FOXC2Q99958 501 aa14.31□□□□□ -0.12
TSPAN4-212ENST00000494815 ZNF492Q9P255 531 aa14.31□□□□□ -0.12
TSPAN4-212ENST00000494815 UNC79Q9P2D8 2635 aa14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 CFHR3Q02985 330 aa14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 LYPD1Q8N2G4 141 aa14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 ZFAND3Q9H8U3 227 aa14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 IGLV1-40P01703 118 aa14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 RPL7P18124 248 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 PDE6HQ13956 83 aa14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 CIARTQ8N365 385 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 GTSF1Q8WW33 167 aa14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 SGK494Q96LW2 274 aa14.3□□□□□ -0.12
TSPAN4-212ENST00000494815 C19orf71A6NCJ1 209 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 H3BTX0 84 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 LEPROTL1O95214 131 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 RAB9AP51151 201 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 FOXA3P55318 350 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 LINC00322Q6ZN03 302 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 FMC1Q96HJ9 113 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 GFRA4Q9GZZ7 299 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 LTAP01374 205 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 P01737 135 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 MPV17L2Q567V2 206 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 PRR31Q5SQ13 230 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 TEX15Q9BXT5 2789 aa14.29□□□□□ -0.12
TSPAN4-212ENST00000494815 IGHV3-35A0A0C4DH35 117 aa14.28□□□□□ -0.12
TSPAN4-212ENST00000494815 LINC00173Q6ZV60 143 aa14.28□□□□□ -0.12
TSPAN4-212ENST00000494815 TMEM191AQ9H0A3 160 aa14.28□□□□□ -0.12
TSPAN4-212ENST00000494815 TCRAP04437 139 aa14.27□□□□□ -0.12
TSPAN4-212ENST00000494815 RBPMS2Q6ZRY4 209 aaKnown RBP14.27□□□□□ -0.12
TSPAN4-212ENST00000494815 PGLYRP4Q96LB8 373 aa14.27□□□□□ -0.12
TSPAN4-212ENST00000494815 TP73-AS1Q9UF72 201 aa14.27□□□□□ -0.12
TSPAN4-212ENST00000494815 A0A0G2JLM5 398 aa14.27□□□□□ -0.13
TSPAN4-212ENST00000494815 hDV102S1A0JD36 115 aa14.27□□□□□ -0.13
TSPAN4-212ENST00000494815 PF4V1P10720 104 aa14.27□□□□□ -0.13
TSPAN4-212ENST00000494815 VAMP3Q15836 100 aa14.27□□□□□ -0.13
TSPAN4-212ENST00000494815 SLC25A34Q6PIV7 304 aa14.27□□□□□ -0.13
TSPAN4-212ENST00000494815 SIGLEC15Q6ZMC9 328 aa14.27□□□□□ -0.13
TSPAN4-212ENST00000494815 PDZD2O15018 2839 aa14.27□□□□□ -0.13
TSPAN4-212ENST00000494815 OR5AL1P0C617 328 aa14.26□□□□□ -0.13
TSPAN4-212ENST00000494815 NDFIP1Q9BT67 221 aa14.26□□□□□ -0.13
TSPAN4-212ENST00000494815 LOC102724200A0A096LPH7 203 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-212ENST00000494815 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms