RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 SPINT2O43291 252 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 SLC25A20O43772 301 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 CRLF1O75462 422 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 DUSP14O95147 198 aaKnown RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 NDUFA7O95182 113 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 MT-CO3P00414 261 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 LGALS1P09382 135 aaKnown RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 CD7P09564 240 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 SCGB1C2P0DMR2 95 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 P0DMU3 169 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 FAM231AP0DMU4 169 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 FAM231CP0DMU5 169 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 LIFP15018 202 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 SLC25A16P16260 332 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 RPL7P18124 248 aaKnown RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 ORM2P19652 201 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 PSMB2P49721 201 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 GFERP55789 205 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 TMEM258P61165 79 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 RPS28P62857 69 aaKnown RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 SRSF2Q01130 221 aaKnown RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 FOXF2Q12947 444 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 EBI3Q14213 229 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 TMEM30BQ3MIR4 351 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 MRPL51Q4U2R6 128 aaKnown RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 UTF1Q5T230 341 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 TMEM170BQ5T4T1 132 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 C9orf153Q5TBE3 101 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 ASPHD1Q5U4P2 390 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 Q71RC1 249 aaPredicted RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 AAED1Q7RTV5 226 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 WDR86Q86TI4 376 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 GTSCR1Q86UQ5 136 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 FAM90A1Q86YD7 464 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 YAF2Q8IY57 180 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 SLC22A18ASQ8N1D0 253 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 C10orf126Q8N4M7 172 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 C3orf22Q8N5N4 141 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 C15orf53Q8NAA6 179 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 OR13A1Q8NGR1 328 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 RFESDQ8TAC1 157 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 UBALD1Q8TB05 177 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 FAM57AQ8TBR7 257 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 TIMD4Q96H15 378 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 ODF3Q96PU9 254 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 S1PR3Q99500 378 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 SRSF8Q9BRL6 282 aaKnown RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 PRADC1Q9BSG0 188 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 SCNM1Q9BWG6 230 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 MRPL20Q9BYC9 149 aaKnown RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 ARRDC1-AS1Q9H2J1 176 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 Q9H3A6 140 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 AKIRIN1Q9H9L7 192 aaPredicted RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 C21orf62Q9NYP8 219 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 CALYQ9NYX4 217 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 TMEM14CQ9P0S9 112 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 PROCRQ9UNN8 238 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 CHCHD2Q9Y6H1 151 aaPredicted RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 DSPP15924 2871 aaKnown RBP2.14□□□□□ -2.07
MDC1-208ENST00000494654 CEP295Q9C0D2 2601 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 UNC79Q9P2D8 2635 aa2.14□□□□□ -2.07
MDC1-208ENST00000494654 LOC400499M0QZD8 3231 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 IGLV2-18A0A075B6J9 118 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 IGKV1D-37A0A075B6S9 117 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 IGKV3D-15A0A087WSY6 115 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 IGHV3-43A0A0B4J1X8 118 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 TRAV2A0A0B4J234 112 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 TRAV3A0A0B4J244 114 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 A0A0B4J2C4 111 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 LOC107984156A0A0G2JMH3 177 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 A0A0J9YW62 118 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 SPTY2D1-AS1A0A0U1RR47 76 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 FAM236AA0A1B0GUQ0 79 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 FAM236BA0A1B0GV22 79 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 IQCF6A8MYZ5 107 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 C9JAW5 83 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 F8WDY8 70 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 LGALS9O00182 355 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 UPK2O00526 184 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 DUX1O43812 170 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 ZFAND5O76080 213 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 IGLV2-11P01706 119 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 CRYGDP07320 174 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 CECR9P0C854 216 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 IGLC6P0CF74 106 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 LINC00694P0DN24 101 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 IGHV3-43DP0DP04 118 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 CRYGAP11844 174 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 COX6B1P14854 86 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 HLA-DMBP28068 263 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 GLRXP35754 106 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 TNFRSF4P43489 277 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 SUB1P53999 127 aaKnown RBP eCLIP2.13□□□□□ -2.07
MDC1-208ENST00000494654 UCNP55089 124 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 HERVK_113P63121 156 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 PLGLAQ15195 96 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 ATXN8Q156A1 80 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 DEFB121Q5J5C9 76 aa2.13□□□□□ -2.07
MDC1-208ENST00000494654 MBNL2Q5VZF2 373 aaKnown RBP2.13□□□□□ -2.07
MDC1-208ENST00000494654 TEX36Q5VZQ5 186 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms