RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 A0A1B0GVY2 172 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 GAGE12BA1L429 117 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 E5RGE8 158 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 GAGE7O76087 117 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 NDUFB4O95168 129 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 GAGE12FP0CL80 117 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 GAGE12GP0CL81 117 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 GAGE12IP0CL82 117 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 HIST1H1EP10412 219 aaKnown RBP6.73□□□□□ -1.33
MSH5-218ENST00000494646 CLINT1Q14677 625 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 ZNF493Q6ZR52 646 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 MIR17HGQ75NE6 70 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 C15orf53Q8NAA6 179 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 RNASE8Q8TDE3 154 aaKnown RBP6.73□□□□□ -1.33
MSH5-218ENST00000494646 TMEM263Q8WUH6 116 aaKnown RBP6.73□□□□□ -1.33
MSH5-218ENST00000494646 NPCDR1Q9BY65 106 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 NMES1Q9C002 83 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 SLC25A31Q9H0C2 315 aa6.73□□□□□ -1.33
MSH5-218ENST00000494646 APOBP04114 4563 aaKnown RBP6.72□□□□□ -1.33
MSH5-218ENST00000494646 A0A0J9YY99 117 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 SNURFLB1AK76 121 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 NPIPB6E9PJ23 425 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 MPDU1O75352 247 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 RNASE4P34096 147 aaKnown RBP6.72□□□□□ -1.33
MSH5-218ENST00000494646 LEPP41159 167 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 FAM122CQ6P4D5 195 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 Q6ZR54 194 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 C20orf144Q9BQM9 153 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 SLC25A2Q9BXI2 301 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 KRTAP17-1Q9BYP8 105 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 AGPAT4-IT1Q9H0P7 198 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 TMEM14CQ9P0S9 112 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 HSPG2P98160 4391 aa6.72□□□□□ -1.33
MSH5-218ENST00000494646 MUC4Q99102 2169 aa6.71□□□□□ -1.33
MSH5-218ENST00000494646 ZNF253O75346 499 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 NBEAP1P0C6P0 100 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 HOXA5P20719 270 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 CD300CQ08708 224 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 BTN1A1Q13410 526 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 ICAM4Q14773 271 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 FAM167A-AS1Q96KT0 104 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 LINC00477Q96M19 166 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 OR51M1Q9H341 326 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.34
MSH5-218ENST00000494646 TRAV26-1A0A087WT03 109 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 SSNA1O43805 119 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 PRAF2O60831 178 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 EIF3GO75821 320 aaKnown RBP eCLIP6.7□□□□□ -1.34
MSH5-218ENST00000494646 SLC25A5P05141 298 aaKnown RBP6.7□□□□□ -1.34
MSH5-218ENST00000494646 GPX1P07203 203 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 OR10J4P0C629 311 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 CCL18P55774 89 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 H2BFSP57053 126 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 CYCSP99999 105 aaKnown RBP6.7□□□□□ -1.34
MSH5-218ENST00000494646 C1orf134Q5TEV5 83 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 Q6ZQT7 251 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 Q6ZTI0 123 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 PPP1R1CQ8WVI7 109 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 MRPL53Q96EL3 112 aaKnown RBP6.7□□□□□ -1.34
MSH5-218ENST00000494646 ODF3Q96PU9 254 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 VGLL1Q99990 258 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 MARVELD1Q9BSK0 173 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 PAXXQ9BUH6 204 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 SMIM3Q9BZL3 60 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 WDR61Q9GZS3 305 aaKnown RBP6.7□□□□□ -1.34
MSH5-218ENST00000494646 AAMDCQ9H7C9 122 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 PRELID1Q9Y255 219 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 LINC00588Q9Y4M8 146 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 ABCA13Q86UQ4 5058 aa6.7□□□□□ -1.34
MSH5-218ENST00000494646 IGKV2-40A0A087WW87 121 aaPredicted RBP6.69□□□□□ -1.34
MSH5-218ENST00000494646 C7orf71A4D174 169 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 ZNF324O75467 553 aaPredicted RBP6.69□□□□□ -1.34
MSH5-218ENST00000494646 MPC2O95563 127 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 IGKV2D-40P01614 121 aaPredicted RBP6.69□□□□□ -1.34
MSH5-218ENST00000494646 RANP62826 216 aaKnown RBP6.69□□□□□ -1.34
MSH5-218ENST00000494646 PDE6HQ13956 83 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 SOHLH1Q5JUK2 328 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 TMEM78Q5T7P6 136 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 SSX7Q7RTT5 188 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 ZNRF2Q8NHG8 242 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 GNPNAT1Q96EK6 184 aaPredicted RBP6.69□□□□□ -1.34
MSH5-218ENST00000494646 PYGO2Q9BRQ0 406 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 GSN-AS1Q9NRJ2 163 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 PTTG2Q9NZH5 202 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 FUT9Q9Y231 359 aa6.69□□□□□ -1.34
MSH5-218ENST00000494646 NBDYA0A0U1RRE5 68 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 KLLNB2CW77 178 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 C17orf112F2Z3M2 114 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 M6PRP20645 277 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 FFAR4Q5NUL3 377 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 PRR9Q5T870 116 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 C9orf47Q6ZRZ4 202 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 EIF4E3Q8N5X7 224 aaKnown RBP6.68□□□□□ -1.34
MSH5-218ENST00000494646 LINC00612Q8N6U2 182 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 FXYD5Q96DB9 178 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 PHYHIPLQ96FC7 376 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 FAM19A4Q96LR4 140 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 MRPL18Q9H0U6 180 aaKnown RBP6.68□□□□□ -1.34
MSH5-218ENST00000494646 TMPRSS5Q9H3S3 457 aa6.68□□□□□ -1.34
MSH5-218ENST00000494646 TP53TG3Q9ULZ0 132 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms