RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 UBE2D3P61077 147 aa7.9□□□□□ -1.14
LINC00488-201ENST00000494582 UBE2D2P62837 147 aa7.9□□□□□ -1.14
LINC00488-201ENST00000494582 Q6ZT83 130 aa7.9□□□□□ -1.14
LINC00488-201ENST00000494582 TEX29Q8N6K0 151 aa7.9□□□□□ -1.14
LINC00488-201ENST00000494582 OR4C13Q8NGP0 309 aa7.9□□□□□ -1.14
LINC00488-201ENST00000494582 RPEQ96AT9 228 aa7.9□□□□□ -1.14
LINC00488-201ENST00000494582 MYMXA0A1B0GTQ4 84 aa7.9□□□□□ -1.15
LINC00488-201ENST00000494582 ZNF688P0C7X2 276 aa7.9□□□□□ -1.15
LINC00488-201ENST00000494582 ANKRD29Q8N6D5 301 aa7.9□□□□□ -1.15
LINC00488-201ENST00000494582 CNEP1R1Q8N9A8 125 aa7.9□□□□□ -1.15
LINC00488-201ENST00000494582 PLEKHB2Q96CS7 222 aa7.9□□□□□ -1.15
LINC00488-201ENST00000494582 A0A087WX48 190 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 TRAV4A0A0B4J268 109 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 SRD5A1P18405 259 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 C6orf15Q6UXA7 325 aaPredicted RBP7.89□□□□□ -1.15
LINC00488-201ENST00000494582 TMEM105Q8N8V8 129 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 SHANK2-AS3Q9BTD1 123 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 RHODO00212 210 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 IGLV1-44P01699 117 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 UBE2D1P51668 147 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 NDUFV3P56181 108 aaKnown RBP7.89□□□□□ -1.15
LINC00488-201ENST00000494582 RAB9BQ9NP90 201 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 NXT2Q9NPJ8 142 aaKnown RBP7.89□□□□□ -1.15
LINC00488-201ENST00000494582 PROCRQ9UNN8 238 aa7.89□□□□□ -1.15
LINC00488-201ENST00000494582 TNRC18O15417 2968 aaPredicted RBP7.88□□□□□ -1.15
LINC00488-201ENST00000494582 NCBP2LA6PVI3 153 aaKnown RBP7.88□□□□□ -1.15
LINC00488-201ENST00000494582 PRTN3P24158 256 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 PLCE1Q9P212 2302 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 TRGV5A0A0B4J1U4 118 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 TRAV26-2A0A0B4J265 109 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 LINC01619G3V211 115 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 H3BRN7 92 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 K7EM74 188 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 IGFBP4P22692 258 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 IGFL4Q6B9Z1 124 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 SBSPONQ8IVN8 264 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 Q8N8P6 123 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 TACC2O95359 2948 aa7.88□□□□□ -1.15
LINC00488-201ENST00000494582 H3BVH4 76 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 TRGV3P03979 118 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 CD7P09564 240 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 DTX2Q86UW9 622 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 SCNM1Q9BWG6 230 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 FBXL15Q9H469 300 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 GAGE12JA6NER3 117 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 FABP5P3A8MUU1 101 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 I3L2K1 104 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 K7ESF4 209 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 GAGE7O76087 117 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 GAGE12FP0CL80 117 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 GAGE12GP0CL81 117 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 GAGE12IP0CL82 117 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 MZT1Q08AG7 82 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 GAGE4Q13068 117 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 TMEM78Q5T7P6 136 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 Q6ZQT7 251 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 PRR25Q96S07 402 aa7.87□□□□□ -1.15
LINC00488-201ENST00000494582 TEX22C9J3V5 150 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 ENSAO43768 121 aaKnown RBP7.86□□□□□ -1.15
LINC00488-201ENST00000494582 RPL27AP46776 148 aaKnown RBP7.86□□□□□ -1.15
LINC00488-201ENST00000494582 CRIP2P52943 208 aaPredicted RBP7.86□□□□□ -1.15
LINC00488-201ENST00000494582 DLX1P56177 255 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 PRB3Q04118 309 aaPredicted RBP7.86□□□□□ -1.15
LINC00488-201ENST00000494582 ZNF784Q8NCA9 323 aaPredicted RBP7.86□□□□□ -1.15
LINC00488-201ENST00000494582 MDS2Q8NDY4 140 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 RASL11BQ9BPW5 248 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 RNF7Q9UBF6 113 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 S4R3C0 116 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 PATE3B3GLJ2 98 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 TM4SF5O14894 197 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 WT1P19544 449 aaPredicted RBP7.86□□□□□ -1.15
LINC00488-201ENST00000494582 HLA-DMBP28068 263 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 SPRY4Q9C004 299 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 DKK4Q9UBT3 224 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 TNFRSF18Q9Y5U5 241 aa7.86□□□□□ -1.15
LINC00488-201ENST00000494582 CEACAM4O75871 244 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 VMA21Q3ZAQ7 101 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 FAM159AQ6UWV7 190 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 LYPD1Q8N2G4 141 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 ZNF491Q8N8L2 437 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 NRACQ8N912 160 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 MYOZ3Q8TDC0 251 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 HIF1ANQ9NWT6 349 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 BOD1L1Q8NFC6 3051 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 A8MWV9 139 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 ORM1P02763 201 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 PLNP26678 52 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 TMEM200BQ69YZ2 307 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 PIP4P1Q86T03 277 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 C9orf106Q8NAJ2 232 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 KLHL30-AS1Q8NEE0 82 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 PRADC1Q9BSG0 188 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 CNFNQ9BYD5 112 aa7.85□□□□□ -1.15
LINC00488-201ENST00000494582 F8VRH5 84 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 IGHG4P01861 327 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 GAGE2BQ13066 116 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 LAGE3Q14657 143 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 GAGE2EQ4V326 116 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 COX8CQ7Z4L0 72 aa7.84□□□□□ -1.15
LINC00488-201ENST00000494582 NDUFA11Q86Y39 141 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms