RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CYB5BO43169 146 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 TNFSF15O95150 251 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 SRIP30626 198 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 GLRXP35754 106 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 PSMD8P48556 350 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 CRYBG3Q68DQ2 2970 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 AGTRAPQ6RW13 159 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 HIST3H2BBQ8N257 126 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 EXOC3-AS1Q8N2X6 119 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 C12orf29Q8N999 325 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 PFN4Q8NHR9 129 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 C11orf40Q8WZ69 217 aa2.34□□□□□ -2.03
GTF3A-208ENST00000493903 MRPS24Q96EL2 167 aaKnown RBP2.34□□□□□ -2.03
GTF3A-208ENST00000493903 PDZD2O15018 2839 aa2.34□□□□□ -2.04
GTF3A-208ENST00000493903 SETD2Q9BYW2 2564 aaPredicted RBP2.34□□□□□ -2.04
GTF3A-208ENST00000493903 SCN8AQ9UQD0 1980 aa2.34□□□□□ -2.04
GTF3A-208ENST00000493903 F8P00451 2351 aa2.34□□□□□ -2.04
GTF3A-208ENST00000493903 HIVEP1P15822 2718 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 MUC21A0A0G2JKD1 596 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 MUC21A0A140T8X8 626 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 LOC105371267A0A1B0GV96 52 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 PRORSD1PA6NEY8 169 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 E7EQ34 232 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 BANF1O75531 89 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 FXYD2P54710 66 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 ZNF90Q03938 601 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 EIF3IQ13347 325 aaKnown RBP2.33□□□□□ -2.04
GTF3A-208ENST00000493903 KISS1Q15726 138 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 DEFB133Q30KQ1 61 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 KRTAP21-3Q3LHN1 58 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 CLVS1Q8IUQ0 354 aaPredicted RBP2.33□□□□□ -2.04
GTF3A-208ENST00000493903 OR51T1Q8NGJ9 327 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 SKA2Q8WVK7 121 aaPredicted RBP2.33□□□□□ -2.04
GTF3A-208ENST00000493903 DNAJC9Q8WXX5 260 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 SLAMF6Q96DU3 332 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 Q9BRP9 147 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 BATF3Q9NR55 127 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 LAMTOR3Q9UHA4 124 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 MTORP42345 2549 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 POLQO75417 2590 aa2.33□□□□□ -2.04
GTF3A-208ENST00000493903 APCP25054 2843 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 ZFC3H1O60293 1989 aaKnown RBP2.32□□□□□ -2.04
GTF3A-208ENST00000493903 A0A087X0T9 212 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 TRBV10-2A0A0K0K1G8 114 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 SPTY2D1-AS1A0A0U1RR47 76 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 A0A1W2PRE2 83 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 ZNF860A6NHJ4 632 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 TMEM212A6NML5 194 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 CSN2P05814 226 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 RAB4BP61018 213 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 BPIFA4PQ86YQ2 179 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 LINC00304Q8N9R0 145 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 DNAJC30Q96LL9 226 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 C20orf166-AS1Q96NR2 134 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 OR2J1Q9GZK6 312 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 TCEAL2Q9H3H9 227 aaPredicted RBP2.32□□□□□ -2.04
GTF3A-208ENST00000493903 OSTCQ9NRP0 149 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 SPANXA1Q9NS26 97 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 NDUFB11Q9NX14 153 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 PRO0461Q9UI25 63 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 HSPB11Q9Y547 144 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 RP1P56715 2156 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 SDK2Q58EX2 2172 aa2.32□□□□□ -2.04
GTF3A-208ENST00000493903 IGHV1-18A0A0C4DH31 117 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 A0A0D9SEW6 157 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 E7EQL1 145 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 GGCTO75223 188 aaKnown RBP2.31□□□□□ -2.04
GTF3A-208ENST00000493903 TCL1BO95988 128 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 S100GP29377 79 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 SNRPFP62306 86 aaKnown RBP2.31□□□□□ -2.04
GTF3A-208ENST00000493903 SUPT4H1P63272 117 aaKnown RBP2.31□□□□□ -2.04
GTF3A-208ENST00000493903 SIGLECL1Q8N7X8 197 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 OR8D4Q8NGM9 314 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 CANT1Q8WVQ1 401 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 TMEM106AQ96A25 262 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 CCDC32Q9BV29 185 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 RTL8AQ9BWD3 113 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 C8orf4Q9NR00 106 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 CKLFQ9UBR5 152 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 EPDR1Q9UM22 224 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 HIVEP3Q5T1R4 2406 aa2.31□□□□□ -2.04
GTF3A-208ENST00000493903 RP1L1Q8IWN7 2480 aaPredicted RBP2.31□□□□□ -2.04
GTF3A-208ENST00000493903 NAV3Q8IVL0 2385 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 A0A0D9SG52 128 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 MEIS3P1A6NDR6 274 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 C1orf196B1AJZ1 125 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 TAX1BP3O14907 124 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 IGKV1-17P01599 117 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 PPBPP02775 128 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 IGKV1-16P04430 117 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 SCGB1A1P11684 91 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 CCL4P13236 92 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 OGNP20774 298 aaKnown RBP2.3□□□□□ -2.04
GTF3A-208ENST00000493903 FUSP35637 526 aaKnown RBP eCLIP2.3□□□□□ -2.04
GTF3A-208ENST00000493903 SRP14P37108 136 aaKnown RBP2.3□□□□□ -2.04
GTF3A-208ENST00000493903 EIF2B2P49770 351 aaKnown RBP2.3□□□□□ -2.04
GTF3A-208ENST00000493903 ARPC4P59998 168 aa2.3□□□□□ -2.04
GTF3A-208ENST00000493903 EIF5AP63241 154 aaKnown RBP2.3□□□□□ -2.04
GTF3A-208ENST00000493903 SARNPP82979 210 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 282.5 ms