RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 CSN3P07498 182 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 GTF2H5Q6ZYL4 71 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 BCL6BQ8N143 479 aaPredicted RBP10.74□□□□□ -0.69
VCP-207ENST00000493886 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 C17orf77Q96MU5 243 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 TPPP3Q9BW30 176 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 IGHV3OR16-10A0A075B7F0 116 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 ATP6V0E1O15342 81 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 COL8A1P27658 744 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 ECSCRQ19T08 205 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 FAM110DQ8TAY7 271 aaPredicted RBP10.74□□□□□ -0.69
VCP-207ENST00000493886 MLST8Q9BVC4 326 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 A0A1B0GXF2 115 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 TCTEX1D4Q5JR98 221 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 RNF183Q96D59 192 aa10.74□□□□□ -0.69
VCP-207ENST00000493886 MRPS12O15235 138 aaKnown RBP10.73□□□□□ -0.69
VCP-207ENST00000493886 LTAP01374 205 aa10.73□□□□□ -0.69
VCP-207ENST00000493886 COL12A1Q99715 3063 aa10.73□□□□□ -0.69
VCP-207ENST00000493886 IGHV1-69DA0A0B4J2H0 117 aa10.73□□□□□ -0.69
VCP-207ENST00000493886 A8MWL6 223 aa10.73□□□□□ -0.69
VCP-207ENST00000493886 IGHV1-69P01742 117 aa10.73□□□□□ -0.69
VCP-207ENST00000493886 IGLL1P15814 213 aa10.73□□□□□ -0.69
VCP-207ENST00000493886 RPL24P83731 157 aaKnown RBP10.73□□□□□ -0.69
VCP-207ENST00000493886 CHRDL1Q9BU40 450 aa10.73□□□□□ -0.69
VCP-207ENST00000493886 TSSC4Q9Y5U2 329 aaPredicted RBP10.73□□□□□ -0.69
VCP-207ENST00000493886 IGHV4-30-2A0A087WSY4 118 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 GAGE10A6NGK3 116 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 C2orf70A6NJV1 201 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 SCGB2A1O75556 95 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 CTSGP08311 255 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 RASL11AQ6T310 242 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 Q86TA4 180 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 USP9XQ93008 2570 aaPredicted RBP10.72□□□□□ -0.69
VCP-207ENST00000493886 TRAV40A0A0B4J280 105 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 CHEK1O14757 476 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 PRB1P04280 392 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 HSD52Q0P140 79 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 SIGLEC15Q6ZMC9 328 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 PMCHL2Q9BQD1 86 aa10.72□□□□□ -0.69
VCP-207ENST00000493886 LINC01548A6NM66 108 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 BRD3OSQ6XYD6 125 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 C5orf56Q8N8D9 126 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 ZNF414Q96IQ9 312 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 IGHV1-24A0A0C4DH33 117 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 hDV102S1A0JD36 115 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 KLF5Q13887 457 aaPredicted RBP10.71□□□□□ -0.69
VCP-207ENST00000493886 C15orf32Q32M92 178 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 LYPD1Q8N2G4 141 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 KLHDC1Q8N7A1 406 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 TMEM190Q8WZ59 177 aa10.71□□□□□ -0.69
VCP-207ENST00000493886 SPG11Q96JI7 2443 aa10.71□□□□□ -0.7
VCP-207ENST00000493886 C19orf71A6NCJ1 209 aa10.71□□□□□ -0.7
VCP-207ENST00000493886 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.7
VCP-207ENST00000493886 G3V318 75 aa10.71□□□□□ -0.7
VCP-207ENST00000493886 KLK9Q2XQG4 91 aa10.71□□□□□ -0.7
VCP-207ENST00000493886 MPV17L2Q567V2 206 aa10.71□□□□□ -0.7
VCP-207ENST00000493886 TMEM219Q86XT9 240 aa10.71□□□□□ -0.7
VCP-207ENST00000493886 CITED2Q99967 270 aaPredicted RBP10.71□□□□□ -0.7
VCP-207ENST00000493886 KLK9Q9UKQ9 250 aa10.71□□□□□ -0.7
VCP-207ENST00000493886 FLNCQ14315 2725 aa10.71□□□□□ -0.7
VCP-207ENST00000493886 TRAV9-2A0A087WT02 112 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 M0R3E3 92 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 IGLV2-11P01706 119 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 ATP5L2Q7Z4Y8 100 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 ZNF502Q8TBZ5 544 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 PRSS22Q9GZN4 317 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 MRPS16Q9Y3D3 137 aaKnown RBP10.7□□□□□ -0.7
VCP-207ENST00000493886 TRAV25A0A0B4J276 109 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 OR4C46A6NHA9 309 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 RBPMS2Q6ZRY4 209 aaKnown RBP10.7□□□□□ -0.7
VCP-207ENST00000493886 TMEM70Q9BUB7 260 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 ZNF492Q9P255 531 aa10.7□□□□□ -0.7
VCP-207ENST00000493886 MUC21A0A0G2JKD1 596 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 MUC21A0A140T8X8 626 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 MUC21Q5SSG8 566 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 PIFOQ8TCI5 191 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 MOB4Q9Y3A3 225 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 TMSB15BA0A087X1C1 80 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 GPR183P32249 361 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 PDE6HQ13956 83 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 USP24Q9UPU5 2620 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 ZFHX3Q15911 3703 aa10.69□□□□□ -0.7
VCP-207ENST00000493886 LEPROTL1O95214 131 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 IGHV4-38-2P0DP08 117 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 BBC3Q96PG8 261 aaPredicted RBP10.68□□□□□ -0.7
VCP-207ENST00000493886 RABAC1Q9UI14 185 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 CELSR1Q9NYQ6 3014 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 IGHV3-35A0A0C4DH35 117 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 TRBV6-1A0A0K0K1D8 114 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 PPDPFQ9H3Y8 114 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 IGHV3OR16-8A0A075B7F1 116 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 MSMBP08118 114 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 RPL7P18124 248 aaKnown RBP10.68□□□□□ -0.7
VCP-207ENST00000493886 TMEM75Q8N9X5 138 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 NRGNQ92686 78 aa10.68□□□□□ -0.7
VCP-207ENST00000493886 CT83Q5H943 113 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms