RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 NMBP08949 121 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 CT45A10P0DMU9 189 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 IL7P13232 177 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 SULT1A1P50225 295 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 S100A10P60903 97 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 NFE4Q86UQ8 179 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 EIF4E3Q8N5X7 224 aaKnown RBP8.04□□□□□ -1.12
COL6A3-213ENST00000493475 ZNF431Q8TF32 576 aaPredicted RBP8.04□□□□□ -1.12
COL6A3-213ENST00000493475 SAT2Q96F10 170 aaPredicted RBP8.04□□□□□ -1.12
COL6A3-213ENST00000493475 C18orf15Q96N68 181 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 TMPRSS5Q9H3S3 457 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 TMEM14CQ9P0S9 112 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 WDR83OSQ9Y284 106 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 ICOSQ9Y6W8 199 aa8.04□□□□□ -1.12
COL6A3-213ENST00000493475 TRBV19A0A075B6N1 114 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 UBE2L5PA0A1B0GUS4 154 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 PRAC2D3DTV9 90 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 H3BQ15 152 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 SIVA1O15304 175 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 ERVFC1-1P60608 527 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 ARL16Q0P5N6 197 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 ESRGQ1W209 222 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 ANXA2RQ3ZCQ2 193 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 IBA57Q5T440 356 aaKnown RBP8.03□□□□□ -1.12
COL6A3-213ENST00000493475 MIC13Q5XKP0 118 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 C2orf50Q96LR7 162 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 LINC00467Q9BRT7 94 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 PARD6GQ9BYG4 376 aaPredicted RBP8.03□□□□□ -1.12
COL6A3-213ENST00000493475 GPN1Q9HCN4 374 aaPredicted RBP8.03□□□□□ -1.12
COL6A3-213ENST00000493475 LYRM2Q9NU23 88 aaPredicted RBP8.03□□□□□ -1.12
COL6A3-213ENST00000493475 FUT9Q9Y231 359 aa8.03□□□□□ -1.12
COL6A3-213ENST00000493475 K7EP13 123 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 CCSO14618 274 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 PAX4O43316 350 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 LYRM1O43325 122 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 HOXA5P20719 270 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 FGF7P21781 194 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 RNASE4P34096 147 aaKnown RBP8.02□□□□□ -1.13
COL6A3-213ENST00000493475 CSN1S1P47710 185 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 Q6ZTI0 123 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 Q8N1X5 172 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 PCNPQ8WW12 178 aaKnown RBP8.02□□□□□ -1.13
COL6A3-213ENST00000493475 SCRT2Q9NQ03 307 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 GSN-AS1Q9NRJ2 163 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 ZNF586Q9NXT0 402 aa8.02□□□□□ -1.13
COL6A3-213ENST00000493475 TCRBP04435 133 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 PRB4P10163 310 aaPredicted RBP8.01□□□□□ -1.13
COL6A3-213ENST00000493475 TCL1AP56279 114 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 ZNF415Q09FC8 603 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 KIR3DS1Q14943 382 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 VWC2Q2TAL6 325 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 CHAC2Q8WUX2 184 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 SLC25A31Q9H0C2 315 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 NUDT15Q9NV35 164 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 PRO0255Q9UI72 69 aa8.01□□□□□ -1.13
COL6A3-213ENST00000493475 DYNC1H1Q14204 4646 aaKnown RBP8.01□□□□□ -1.13
COL6A3-213ENST00000493475 ABCA13Q86UQ4 5058 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 TRAV6A0A075B6T7 132 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 A0A096LPF7 62 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 TRAV5A0A0B4J249 113 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 TRBV7-9A0A0J9YWB2 115 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 FAM24AA6NFZ4 105 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 KLLNB2CW77 178 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 C17orf112F2Z3M2 114 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 IFNA5P01569 189 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 BTCP35070 178 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 MRPL23Q16540 153 aaKnown RBP8□□□□□ -1.13
COL6A3-213ENST00000493475 MORN5Q5VZ52 161 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 MZT2BQ6NZ67 158 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 TMEM252Q8N6L7 170 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 BLNKQ8WV28 456 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 ST6GAL2Q96JF0 529 aa8□□□□□ -1.13
COL6A3-213ENST00000493475 RBM38Q9H0Z9 239 aaKnown RBP8□□□□□ -1.13
COL6A3-213ENST00000493475 IGHV1OR15-1A0A075B7D0 117 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 M0R3E3 92 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 SPINK4O60575 86 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 ZNF324O75467 553 aaPredicted RBP7.99□□□□□ -1.13
COL6A3-213ENST00000493475 CRISP2P16562 243 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 LINC00315P59091 139 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 BTN1A1Q13410 526 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 ICAM4Q14773 271 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 C9orf47Q6ZRZ4 202 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 VGLL1Q99990 258 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 SSBP4Q9BWG4 385 aaPredicted RBP7.99□□□□□ -1.13
COL6A3-213ENST00000493475 NPCDR1Q9BY65 106 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 MRPL32Q9BYC8 188 aaKnown RBP7.99□□□□□ -1.13
COL6A3-213ENST00000493475 KRTAP4-7Q9BYR0 210 aa7.99□□□□□ -1.13
COL6A3-213ENST00000493475 TRGV4A0A0C4DH28 118 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 FAM240BA0A1B0GVZ2 78 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 NXPH4O95158 308 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 ORM1P02763 201 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 NBEAP1P0C6P0 100 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 EVI2AP22794 236 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 SRIP30626 198 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 ZNF138P52744 262 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 ERCC8Q13216 396 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 FAM122CQ6P4D5 195 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 NEGR1Q7Z3B1 354 aa7.98□□□□□ -1.13
COL6A3-213ENST00000493475 C11orf72Q8NBR9 251 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms