RNA–Protein interactions for RNA: ENST00000492826.1

GCFC2-210, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 3

Gene GCFC2, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-210	ENST00000492826	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	TRBV27	A0A0K0K1C4	114 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	LOC107984640	A0A0U1RRK4	108 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	PRORSD1P	A6NEY8	169 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	ARL5C	A6NH57	179 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	CRYGS	P22914	178 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	SPATA45	Q537H7	98 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	ZCCHC23	Q6ZST2	131 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	AKAP14	Q86UN6	197 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	TAC4	Q86UU9	113 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	GINS2	Q9Y248	185 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	BCL9	O00512	1426 aa		1.04	□□□□□ -2.24
GCFC2-210	ENST00000492826	TENM1	Q9UKZ4	2725 aa		1.03	□□□□□ -2.24
GCFC2-210	ENST00000492826	UNC13C	Q8NB66	2214 aa		1.03	□□□□□ -2.24
GCFC2-210	ENST00000492826	RPS3	P23396	243 aa	Known RBP eCLIP	1.03	□□□□□ -2.24
GCFC2-210	ENST00000492826	EFNA4	P52798	201 aa		1.03	□□□□□ -2.24
GCFC2-210	ENST00000492826	LIMD2	Q9BT23	127 aa		1.03	□□□□□ -2.24
GCFC2-210	ENST00000492826	CBLN4	Q9NTU7	201 aa		1.03	□□□□□ -2.24
GCFC2-210	ENST00000492826	HSPB8	Q9UJY1	196 aa		1.03	□□□□□ -2.24
GCFC2-210	ENST00000492826	RFX7	Q2KHR2	1363 aa		1.03	□□□□□ -2.24
GCFC2-210	ENST00000492826	TCOF1	Q13428	1488 aa	Known RBP	1.03	□□□□□ -2.24
GCFC2-210	ENST00000492826	MYO18A	Q92614	2054 aa	Known RBP	1.03	□□□□□ -2.25
GCFC2-210	ENST00000492826	SNRNP200	O75643	2136 aa	Known RBP	1.03	□□□□□ -2.25
GCFC2-210	ENST00000492826	LOC107986453	A0A1B0GWG9	222 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826		J3KT08	172 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	A2M	P01023	1474 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	CD14	P08571	375 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	ROS1	P08922	2347 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	SAA1	P0DJI8	122 aa	Predicted RBP	1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	SRP9	P49458	86 aa	Known RBP	1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	FOXA3	P55318	350 aa	Predicted RBP	1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	FLG2	Q5D862	2391 aa	Predicted RBP	1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	LINC00269	Q8N2A0	174 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	TMEM229B	Q8NBD8	167 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	MORN4	Q8NDC4	146 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	OR51A4	Q8NGJ6	313 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	CCL4L1	Q8NHW4	92 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	AP1S3	Q96PC3	154 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	ANKRD30A	Q9BXX3	1397 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	CALML5	Q9NZT1	146 aa		1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	PHRF1	Q9P1Y6	1649 aa	Known RBP	1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	KMT2B	Q9UMN6	2715 aa	Predicted RBP	1.02	□□□□□ -2.25
GCFC2-210	ENST00000492826	FREM3	P0C091	2139 aa		1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	TANC2	Q9HCD6	1990 aa		1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	PTPRD	P23468	1912 aa		1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	FER1L6	Q2WGJ9	1857 aa		1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	TRBV7-6	A0A0J9YX20	115 aa		1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	BBIP1	A8MTZ0	92 aa		1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	LSM3	P62310	102 aa	Known RBP	1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	GLIPR1L1	Q6UWM5	242 aa		1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	OR8I2	Q8N0Y5	310 aa		1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	C5orf17	Q8NAS9	161 aa		1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	CIB3	Q96Q77	187 aa	Predicted RBP	1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	BOK	Q9UMX3	212 aa	Predicted RBP	1.01	□□□□□ -2.25
GCFC2-210	ENST00000492826	FAM135B	Q49AJ0	1406 aa		1	□□□□□ -2.25
GCFC2-210	ENST00000492826	ERBIN	Q96RT1	1412 aa		1	□□□□□ -2.25
GCFC2-210	ENST00000492826	EDF1	O60869	148 aa	Known RBP	1	□□□□□ -2.25
GCFC2-210	ENST00000492826	SULT1C4	O75897	302 aa		1	□□□□□ -2.25
GCFC2-210	ENST00000492826	SLC25A4	P12235	298 aa		1	□□□□□ -2.25
GCFC2-210	ENST00000492826	BLCAP	P62952	87 aa		1	□□□□□ -2.25
GCFC2-210	ENST00000492826	OCIAD2	Q56VL3	154 aa		1	□□□□□ -2.25
GCFC2-210	ENST00000492826	LINC00299	Q6ZSB3	139 aa		1	□□□□□ -2.25
GCFC2-210	ENST00000492826	C3orf62	Q6ZUJ4	267 aa		1	□□□□□ -2.25
GCFC2-210	ENST00000492826	NABP2	Q9BQ15	211 aa		1	□□□□□ -2.25
GCFC2-210	ENST00000492826	COL1A1	P02452	1464 aa	Predicted RBP	0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	DPM2	O94777	84 aa		0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	IGLV3-1	P01715	115 aa		0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	NBEAP1	P0C6P0	100 aa		0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	CMPK1	P30085	196 aa		0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	SDC4	P31431	198 aa		0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	GTF2A1	P52655	376 aa	Predicted RBP	0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	PSPH	P78330	225 aa		0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	OR5A2	Q8NGI9	324 aa		0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	PYDC1	Q8WXC3	89 aa		0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	AIF1L	Q9BQI0	150 aa		0.99	□□□□□ -2.25
GCFC2-210	ENST00000492826	OVOS2	A0A0G2JMS6	1433 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	DSPP	Q9NZW4	1301 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	NUPR2	A6NF83	97 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	DEGS1	O15121	323 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	IGHV3-33	P01772	117 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	HBD	P02042	147 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	TCRA	P04437	139 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	PAEP	P09466	180 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	CKS2	P33552	79 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	RPL22	P35268	128 aa	Known RBP	0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	ETV6	P41212	452 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	PCBD1	P61457	104 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	OR8B8	Q15620	311 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826		Q86TA4	180 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826		Q8N6K4	173 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	OR10AC1	Q8NH08	325 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	SMIM7	Q9BQ49	75 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	LAMA4	Q16363	1823 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	FANCM	Q8IYD8	2048 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	FGD6	Q6ZV73	1430 aa		0.98	□□□□□ -2.25
GCFC2-210	ENST00000492826	USP54	Q70EL1	1684 aa		0.97	□□□□□ -2.25
GCFC2-210	ENST00000492826	TRAV36DV7	A0A075B6V5	113 aa		0.97	□□□□□ -2.25
GCFC2-210	ENST00000492826	MT-ND4L	P03901	98 aa		0.97	□□□□□ -2.25
GCFC2-210	ENST00000492826	FXYD4	P59646	89 aa		0.97	□□□□□ -2.25
GCFC2-210	ENST00000492826	RPL37A	P61513	92 aa	Known RBP	0.97	□□□□□ -2.25

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms