RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 SNRPCP09234 159 aaKnown RBP6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 CT45A10P0DMU9 189 aa6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 CRYBA4P53673 196 aa6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 RRAS2P62070 204 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 POLR2GP62487 172 aaKnown RBP eCLIP6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 ANXA2RQ3ZCQ2 193 aa6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 C4orf46Q504U0 113 aa6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 Q6ZRG5 221 aa6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 ZNF546Q86UE3 836 aa6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 LRTM2Q8N967 370 aa6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 ARPC5LQ9BPX5 153 aa6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 MRPS26Q9BYN8 205 aaKnown RBP6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 CCDC59Q9P031 241 aaKnown RBP6.59□□□□□ -1.35
TNFRSF9-203ENST00000492571 VPS13BQ7Z7G8 4022 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 PRAC2D3DTV9 90 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 FNDC10F2Z333 226 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 CTDSP2O14595 271 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 SPINK4O60575 86 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 C1QBP02746 253 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 ORM1P02763 201 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 GPX1P07203 203 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 TCL1AP56279 114 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 AP3S2P59780 193 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 ZNF415Q09FC8 603 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 RAB31Q13636 194 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 IBA57Q5T440 356 aaKnown RBP6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 LINC00477Q96M19 166 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 TXNDC17Q9BRA2 123 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 MRPL32Q9BYC8 188 aaKnown RBP6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 MIXL1Q9H2W2 232 aa6.58□□□□□ -1.36
TNFRSF9-203ENST00000492571 H3BTX0 84 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 K7EPK0 472 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 MRPS12O15235 138 aaKnown RBP6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 RNASE4P34096 147 aaKnown RBP6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 SLC38A11Q08AI6 406 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 C10orf113Q5VZT2 155 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 PATE2Q6UY27 113 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 SH2D6Q7Z4S9 175 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 WFDC10BQ8IUB3 73 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 C11orf72Q8NBR9 251 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 VGLL1Q99990 258 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 SLC25A21Q9BQT8 299 aaPredicted RBP6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 KLF12Q9Y4X4 402 aa6.57□□□□□ -1.36
TNFRSF9-203ENST00000492571 LINC00854A0A1B0GVQ3 168 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 C9JCJ5 164 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 SLC17A3O00476 420 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 SSSCA1O60232 199 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 SFT2D2O95562 160 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 FHL2Q14192 279 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 SPCS2Q15005 226 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 C12orf45Q8N5I9 185 aaPredicted RBP6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 Q8N814 137 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 MCFD2Q8NI22 146 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 RAB2BQ8WUD1 216 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 MRPL53Q96EL3 112 aaKnown RBP6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 SMIM8Q96KF7 97 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 BCL7BQ9BQE9 202 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 DNAJC4Q9NNZ3 241 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 MRPL16Q9NX20 251 aaKnown RBP6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 PRELID1Q9Y255 219 aa6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 RCL1Q9Y2P8 373 aaKnown RBP6.56□□□□□ -1.36
TNFRSF9-203ENST00000492571 IGHV3-38A0A0C4DH36 116 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 FABP12A6NFH5 140 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 K7EQD1 137 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 AGPAT2O15120 278 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 ZNF253O75346 499 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 NMBP08949 121 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 OR4E1P0C645 316 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 METTL15P1P0C7V9 234 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 IGLC2P0DOY2 106 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 HIST1H1EP10412 219 aaKnown RBP6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 GYPEP15421 78 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 TMBIM6P55061 237 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 BTN1A1Q13410 526 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 OPCMLQ14982 345 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 TMEM78Q5T7P6 136 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 TOMM5Q8N4H5 51 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 OR1L4Q8NGR5 311 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 DYNC2LI1Q8TCX1 351 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 SAT2Q96F10 170 aaPredicted RBP6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 GGACTQ9BVM4 153 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 AAMDCQ9H7C9 122 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 TIMM9Q9Y5J7 89 aa6.55□□□□□ -1.36
TNFRSF9-203ENST00000492571 IGHV1OR15-1A0A075B7D0 117 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 TRAV8-6A0A0B4J262 113 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 KLLNB2CW77 178 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 H3BQ15 152 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 PPT1P50897 306 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 CD300CQ08708 224 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 TDRG1Q3Y452 100 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 IQCF2Q8IXL9 164 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 TMEM37Q8WXS4 190 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 PFDN5Q99471 154 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 SRRQ9GZT4 340 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 SLC25A31Q9H0C2 315 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 Q9HAA7 133 aa6.54□□□□□ -1.36
TNFRSF9-203ENST00000492571 LRCOL1A6NCL2 159 aa6.53□□□□□ -1.36
TNFRSF9-203ENST00000492571 TSC22D2O75157 780 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms