RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 SAA4P35542 130 aa11.9□□□□□ -0.5
TNFRSF1B-203ENST00000492361 ZNF80P51504 273 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1B-203ENST00000492361 TNFRSF14Q92956 283 aa11.9□□□□□ -0.5
TNFRSF1B-203ENST00000492361 C16orf92Q96LL3 132 aa11.9□□□□□ -0.5
TNFRSF1B-203ENST00000492361 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.5
TNFRSF1B-203ENST00000492361 TMEM160Q9NX00 188 aa11.9□□□□□ -0.5
TNFRSF1B-203ENST00000492361 SIGLEC8Q9NYZ4 499 aa11.9□□□□□ -0.5
TNFRSF1B-203ENST00000492361 MGPP08493 103 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 FOXE3Q13461 319 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 FAM71F2Q6NXP2 309 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 C7orf69Q9H7B7 122 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 GOSR1O95249 250 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 IGLV2-11P01706 119 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 CCDC144NLQ6NUI1 221 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 RASL11AQ6T310 242 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 TRAV8-6A0A0B4J262 113 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 RNASE8Q8TDE3 154 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 WIPF2Q8TF74 440 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 PRSS22Q9GZN4 317 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 SOX21Q9Y651 276 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 COX11Q9Y6N1 276 aa11.89□□□□□ -0.51
TNFRSF1B-203ENST00000492361 LEPP41159 167 aa11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 MRPL51Q4U2R6 128 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 PF4V1P10720 104 aa11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 SFTA2Q6UW10 78 aa11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 CHCHD1Q96BP2 118 aaKnown RBP11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 PRTN3P24158 256 aa11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 DKK2Q9UBU2 259 aa11.88□□□□□ -0.51
TNFRSF1B-203ENST00000492361 CRYGBP07316 175 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 ANKRD39Q53RE8 183 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 FLNCQ14315 2725 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 H3BUT2 72 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 TNFRSF13BO14836 293 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 ARL3P36405 182 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 KLF5Q13887 457 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 PRR25Q96S07 402 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 FOXC2Q99958 501 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 CBY1Q9Y3M2 126 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 ZNF492Q9P255 531 aa11.87□□□□□ -0.51
TNFRSF1B-203ENST00000492361 ADORA2A-AS1P86434 159 aa11.86□□□□□ -0.51
TNFRSF1B-203ENST00000492361 SCGB2A2Q13296 93 aa11.86□□□□□ -0.51
TNFRSF1B-203ENST00000492361 EPG5Q9HCE0 2579 aa11.86□□□□□ -0.51
TNFRSF1B-203ENST00000492361 TRAV30A0A087WSZ9 112 aa11.86□□□□□ -0.51
TNFRSF1B-203ENST00000492361 H3BVH4 76 aa11.86□□□□□ -0.51
TNFRSF1B-203ENST00000492361 CTSGP08311 255 aa11.86□□□□□ -0.51
TNFRSF1B-203ENST00000492361 GTSCR1Q86UQ5 136 aa11.86□□□□□ -0.51
TNFRSF1B-203ENST00000492361 PCP2Q8IVA1 136 aa11.86□□□□□ -0.51
TNFRSF1B-203ENST00000492361 HAX1O00165 279 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 TRGV3P03979 118 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 IFI27L1Q96BM0 104 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 HRNRQ86YZ3 2850 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 BMI1P35226 326 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 PSG9Q00887 426 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 MAPK1IP1LQ8NDC0 245 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 JMJD1CQ15652 2540 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 TRAV40A0A0B4J280 105 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 K7EP13 123 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 C12orf54Q6X4T0 127 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 ZNF747Q9BV97 191 aa11.85□□□□□ -0.51
TNFRSF1B-203ENST00000492361 F6UB75 175 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 KLRB1Q12918 225 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 SAPCD1Q5SSQ6 148 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 IGHV7-81A0A0B4J1V7 117 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 FABP5P3A8MUU1 101 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 UBE2V1Q13404 147 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 MAP1LC3AQ9H492 121 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 JKAMPQ9P055 326 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 A0A1W2PPR1 153 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 GAGE10A6NGK3 116 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 F5H697 171 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 NDUFA3O95167 84 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 HIST1H1AQ02539 215 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 FAM104BQ5XKR9 115 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 PET117Q6UWS5 81 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 METTL26Q96S19 204 aa11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 MRPS16Q9Y3D3 137 aaKnown RBP11.84□□□□□ -0.51
TNFRSF1B-203ENST00000492361 INS-IGF2F8WCM5 200 aa11.83□□□□□ -0.52
TNFRSF1B-203ENST00000492361 PPP1R14DQ9NXH3 145 aa11.83□□□□□ -0.52
TNFRSF1B-203ENST00000492361 ACANP16112 2415 aa11.83□□□□□ -0.52
TNFRSF1B-203ENST00000492361 RPL24P83731 157 aaKnown RBP11.83□□□□□ -0.52
TNFRSF1B-203ENST00000492361 ZNF462Q96JM2 2506 aa11.83□□□□□ -0.52
TNFRSF1B-203ENST00000492361 BVES-AS1Q5T3Y7 98 aa11.83□□□□□ -0.52
TNFRSF1B-203ENST00000492361 TMEM14CQ9P0S9 112 aa11.83□□□□□ -0.52
TNFRSF1B-203ENST00000492361 IGLV11-55A0A075B6I3 123 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 HBDP02042 147 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 EMP1P54849 157 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 IGF1P05019 195 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 CT83Q5H943 113 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 IGF2-ASQ6U949 168 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 NEGR1Q7Z3B1 354 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 MTURNQ8N3F0 131 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 CFHR4Q92496 578 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 C8orf31Q8N9H6 132 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
TNFRSF1B-203ENST00000492361 PLP1P60201 277 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms