RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 FFAR4Q5NUL3 377 aa10.54□□□□□ -0.72
TOM1-215ENST00000491987 RNF141Q8WVD5 230 aa10.54□□□□□ -0.72
TOM1-215ENST00000491987 FXYD5Q96DB9 178 aa10.54□□□□□ -0.72
TOM1-215ENST00000491987 LINC00477Q96M19 166 aa10.54□□□□□ -0.72
TOM1-215ENST00000491987 AGPAT4-IT1Q9H0P7 198 aa10.54□□□□□ -0.72
TOM1-215ENST00000491987 ALG5Q9Y673 324 aa10.54□□□□□ -0.72
TOM1-215ENST00000491987 C7orf71A4D174 169 aa10.53□□□□□ -0.72
TOM1-215ENST00000491987 NUDT3O95989 172 aa10.53□□□□□ -0.72
TOM1-215ENST00000491987 BTN1A1Q13410 526 aa10.53□□□□□ -0.72
TOM1-215ENST00000491987 SCGB1C1Q8TD33 95 aa10.53□□□□□ -0.72
TOM1-215ENST00000491987 PHYHIPLQ96FC7 376 aa10.53□□□□□ -0.72
TOM1-215ENST00000491987 FAM19A4Q96LR4 140 aa10.53□□□□□ -0.72
TOM1-215ENST00000491987 PYGO2Q9BRQ0 406 aa10.53□□□□□ -0.72
TOM1-215ENST00000491987 ATG101Q9BSB4 218 aa10.53□□□□□ -0.72
TOM1-215ENST00000491987 DNAH2Q9P225 4427 aa10.53□□□□□ -0.72
TOM1-215ENST00000491987 GAGE12BA1L429 117 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 KLLNB2CW77 178 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 GAGE7O76087 117 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 GAGE12FP0CL80 117 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 GAGE12GP0CL81 117 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 GAGE12IP0CL82 117 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 CD300CQ08708 224 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 TMEM78Q5T7P6 136 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 C9orf47Q6ZRZ4 202 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 LINC00336Q6ZUF6 198 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 VGLL1Q99990 258 aa10.52□□□□□ -0.73
TOM1-215ENST00000491987 EIF3GO75821 320 aaKnown RBP eCLIP10.51□□□□□ -0.73
TOM1-215ENST00000491987 RNASE4P34096 147 aaKnown RBP10.51□□□□□ -0.73
TOM1-215ENST00000491987 UBE2L3P68036 154 aaKnown RBP10.51□□□□□ -0.73
TOM1-215ENST00000491987 LINC00612Q8N6U2 182 aa10.51□□□□□ -0.73
TOM1-215ENST00000491987 ZNF503Q96F45 646 aa10.51□□□□□ -0.73
TOM1-215ENST00000491987 WFDC1Q9HC57 220 aa10.51□□□□□ -0.73
TOM1-215ENST00000491987 RTL8CO15255 209 aa10.5□□□□□ -0.73
TOM1-215ENST00000491987 GPX1P07203 203 aa10.5□□□□□ -0.73
TOM1-215ENST00000491987 CRISP2P16562 243 aa10.5□□□□□ -0.73
TOM1-215ENST00000491987 RANP62826 216 aaKnown RBP10.5□□□□□ -0.73
TOM1-215ENST00000491987 OR5I1Q13606 314 aa10.5□□□□□ -0.73
TOM1-215ENST00000491987 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
TOM1-215ENST00000491987 PRR9Q5T870 116 aa10.5□□□□□ -0.73
TOM1-215ENST00000491987 Q6ZR54 194 aa10.5□□□□□ -0.73
TOM1-215ENST00000491987 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
TOM1-215ENST00000491987 GSN-AS1Q9NRJ2 163 aa10.5□□□□□ -0.73
TOM1-215ENST00000491987 ZNF324O75467 553 aaPredicted RBP10.49□□□□□ -0.73
TOM1-215ENST00000491987 PTTG1O95997 202 aa10.49□□□□□ -0.73
TOM1-215ENST00000491987 DAZ2Q13117 558 aaKnown RBP10.49□□□□□ -0.73
TOM1-215ENST00000491987 Q6ZTI0 123 aa10.49□□□□□ -0.73
TOM1-215ENST00000491987 EIF4E3Q8N5X7 224 aaKnown RBP10.49□□□□□ -0.73
TOM1-215ENST00000491987 ZNF680Q8NEM1 530 aa10.49□□□□□ -0.73
TOM1-215ENST00000491987 Q8TAT8 98 aa10.49□□□□□ -0.73
TOM1-215ENST00000491987 Q9H3A6 140 aa10.49□□□□□ -0.73
TOM1-215ENST00000491987 ZNF492Q9P255 531 aa10.49□□□□□ -0.73
TOM1-215ENST00000491987 FAT2Q9NYQ8 4349 aa10.49□□□□□ -0.73
TOM1-215ENST00000491987 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
TOM1-215ENST00000491987 PRSS29PA6NIE9 313 aa10.48□□□□□ -0.73
TOM1-215ENST00000491987 NMBP08949 121 aa10.48□□□□□ -0.73
TOM1-215ENST00000491987 HOXA5P20719 270 aa10.48□□□□□ -0.73
TOM1-215ENST00000491987 CSN1S1P47710 185 aa10.48□□□□□ -0.73
TOM1-215ENST00000491987 ZNF138P52744 262 aa10.48□□□□□ -0.73
TOM1-215ENST00000491987 FAM3BP58499 235 aaPredicted RBP10.48□□□□□ -0.73
TOM1-215ENST00000491987 TAS2R45P59539 299 aa10.48□□□□□ -0.73
TOM1-215ENST00000491987 LINC00467Q9BRT7 94 aa10.48□□□□□ -0.73
TOM1-215ENST00000491987 NACAE9PAV3 2078 aa10.48□□□□□ -0.73
TOM1-215ENST00000491987 A0A0J9YY99 117 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 RGS13O14921 159 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 M6PRP20645 277 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 RAB2AP61019 212 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 ACOT6Q3I5F7 207 aaPredicted RBP10.47□□□□□ -0.73
TOM1-215ENST00000491987 ANXA2RQ3ZCQ2 193 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 Q6ZQT7 251 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 LYPD1Q8N2G4 141 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 C11orf72Q8NBR9 251 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 GNPNAT1Q96EK6 184 aaPredicted RBP10.47□□□□□ -0.73
TOM1-215ENST00000491987 MED28Q9H204 178 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 TMPRSS5Q9H3S3 457 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 DNAH17Q9UFH2 4485 aa10.47□□□□□ -0.73
TOM1-215ENST00000491987 IGHV1OR15-1A0A075B7D0 117 aa10.46□□□□□ -0.73
TOM1-215ENST00000491987 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.73
TOM1-215ENST00000491987 A0A1B0GVY2 172 aa10.46□□□□□ -0.73
TOM1-215ENST00000491987 CCL18P55774 89 aa10.46□□□□□ -0.73
TOM1-215ENST00000491987 ZNRF2Q8NHG8 242 aa10.46□□□□□ -0.73
TOM1-215ENST00000491987 HYLS1Q96M11 299 aa10.46□□□□□ -0.73
TOM1-215ENST00000491987 TP53TG3Q9ULZ0 132 aa10.46□□□□□ -0.73
TOM1-215ENST00000491987 LINC00588Q9Y4M8 146 aa10.46□□□□□ -0.73
TOM1-215ENST00000491987 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.73
TOM1-215ENST00000491987 TRGV2A0A075B6R0 118 aa10.45□□□□□ -0.74
TOM1-215ENST00000491987 A0A1W2PPV4 95 aa10.45□□□□□ -0.74
TOM1-215ENST00000491987 RBAKDNA6NC62 111 aa10.45□□□□□ -0.74
TOM1-215ENST00000491987 DIRC3C9JPN6 131 aa10.45□□□□□ -0.74
TOM1-215ENST00000491987 RXFP4Q8TDU9 374 aa10.45□□□□□ -0.74
TOM1-215ENST00000491987 ARPC5LQ9BPX5 153 aa10.45□□□□□ -0.74
TOM1-215ENST00000491987 RPH3ALQ9UNE2 315 aa10.45□□□□□ -0.74
TOM1-215ENST00000491987 TRBV7-9A0A0J9YWB2 115 aa10.44□□□□□ -0.74
TOM1-215ENST00000491987 HMGB3O15347 200 aaKnown RBP10.44□□□□□ -0.74
TOM1-215ENST00000491987 TCL1AP56279 114 aa10.44□□□□□ -0.74
TOM1-215ENST00000491987 SOHLH1Q5JUK2 328 aa10.44□□□□□ -0.74
TOM1-215ENST00000491987 IBA57Q5T440 356 aaKnown RBP10.44□□□□□ -0.74
TOM1-215ENST00000491987 SSX7Q7RTT5 188 aa10.44□□□□□ -0.74
TOM1-215ENST00000491987 HSD17B11Q8NBQ5 300 aa10.44□□□□□ -0.74
TOM1-215ENST00000491987 OR10G4Q8NGN3 311 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms