RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 C9orf47Q6ZRZ4 202 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 SLC51BQ86UW2 128 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 ARL6IP6Q8N6S5 226 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 FAM213BQ8TBF2 198 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 ODF3Q96PU9 254 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 LINC01587Q99440 93 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 NEU1Q99519 415 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 AGPAT4-IT1Q9H0P7 198 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 RPH3ALQ9UNE2 315 aa9.8□□□□□ -0.84
DNMT3A-214ENST00000491288 TRAV12-2A0A075B6T6 113 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 RBAKDNA6NC62 111 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 MAP1LC3B2A6NCE7 125 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 DIRC3C9JPN6 131 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 FGF8P55075 233 aaPredicted RBP9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 SUMO1P63165 101 aaKnown RBP9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 ZNF726P1Q15940 193 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 RRN3P1Q2M238 152 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 ZNF705AQ6ZN79 300 aaPredicted RBP9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 TMEM256Q8N2U0 113 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 SUN5Q8TC36 379 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 SFT2D1Q8WV19 159 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 TMED6Q8WW62 240 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 C20orf144Q9BQM9 153 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 NKX6-2Q9C056 277 aaPredicted RBP9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 MAP1LC3BQ9GZQ8 125 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 C11orf68Q9H3H3 251 aaKnown RBP9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 X6R8D5 127 aa9.79□□□□□ -0.84
DNMT3A-214ENST00000491288 IGKV2-40A0A087WW87 121 aaPredicted RBP9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 IGHV4-28A0A0C4DH34 117 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 TMEM189A5PLL7 270 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 TEX46H3BTG2 121 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 J3KRW8 73 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 DEFB4AO15263 64 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 IGKV2D-40P01614 121 aaPredicted RBP9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 GPX1P07203 203 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 RAB5CP51148 216 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 ZNF138P52744 262 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 C1orf158Q8N1D5 194 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 C11orf45Q8TAV5 145 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 VGLL1Q99990 258 aa9.78□□□□□ -0.84
DNMT3A-214ENST00000491288 ALMS1Q8TCU4 4167 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 SERTM2A0A1B0GWG4 89 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 A0A1W2PRE2 83 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 CRXO43186 299 aaPredicted RBP9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 IFNA7P01567 189 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 CD300CQ08708 224 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 SSX7Q7RTT5 188 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 CCDC28AQ8IWP9 274 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 Q8NAQ8 132 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 C5orf17Q8NAS9 161 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 MBD3L1Q8WWY6 194 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 NIPSNAP3BQ9BS92 247 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 TMPRSS5Q9H3S3 457 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 ZNF492Q9P255 531 aa9.77□□□□□ -0.85
DNMT3A-214ENST00000491288 TRAV12-3A0A0B4J271 114 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 CXorf65A6NEN9 183 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 NMBP08949 121 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 RBMY1A1P0DJD3 496 aaKnown RBP9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 RBMY1CP0DJD4 496 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 HTN1P15515 57 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 RNASE4P34096 147 aaKnown RBP9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 FHITP49789 147 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 EMP1P54849 157 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 UBE2G2P60604 165 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 RBMY1FQ15415 496 aaKnown RBP9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 GOLT1AQ6ZVE7 132 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 C9orf62Q8N4C0 152 aa9.76□□□□□ -0.85
DNMT3A-214ENST00000491288 TRBV7-9A0A0J9YWB2 115 aa9.75□□□□□ -0.85
DNMT3A-214ENST00000491288 LOC102723971A0A1B0GUV8 181 aa9.75□□□□□ -0.85
DNMT3A-214ENST00000491288 F6UZH7 168 aa9.75□□□□□ -0.85
DNMT3A-214ENST00000491288 H7BYZ3 331 aa9.75□□□□□ -0.85
DNMT3A-214ENST00000491288 PPT1P50897 306 aa9.75□□□□□ -0.85
DNMT3A-214ENST00000491288 TAS2R60P59551 318 aa9.75□□□□□ -0.85
DNMT3A-214ENST00000491288 PLA2G2EQ9NZK7 142 aa9.75□□□□□ -0.85
DNMT3A-214ENST00000491288 EPDR1Q9UM22 224 aa9.75□□□□□ -0.85
DNMT3A-214ENST00000491288 LENEPQ9Y5L5 61 aa9.75□□□□□ -0.85
DNMT3A-214ENST00000491288 C7orf71A4D174 169 aa9.74□□□□□ -0.85
DNMT3A-214ENST00000491288 ZNF705GA8MUZ8 300 aaPredicted RBP9.74□□□□□ -0.85
DNMT3A-214ENST00000491288 SPART-AS1P0CW21 52 aa9.74□□□□□ -0.85
DNMT3A-214ENST00000491288 CRISP2P16562 243 aa9.74□□□□□ -0.85
DNMT3A-214ENST00000491288 SULT1A2P50226 295 aa9.74□□□□□ -0.85
DNMT3A-214ENST00000491288 GFI1BQ5VTD9 330 aa9.74□□□□□ -0.85
DNMT3A-214ENST00000491288 CST9LP1Q5W188 147 aa9.74□□□□□ -0.85
DNMT3A-214ENST00000491288 NDFIP1Q9BT67 221 aa9.74□□□□□ -0.85
DNMT3A-214ENST00000491288 TEX48A0A1B0GUV7 120 aa9.73□□□□□ -0.85
DNMT3A-214ENST00000491288 A0A1B0GV50 99 aa9.73□□□□□ -0.85
DNMT3A-214ENST00000491288 FBLL1A6NHQ2 334 aaKnown RBP9.73□□□□□ -0.85
DNMT3A-214ENST00000491288 TCRAP04437 139 aa9.73□□□□□ -0.85
DNMT3A-214ENST00000491288 GNG5P63218 68 aa9.73□□□□□ -0.85
DNMT3A-214ENST00000491288 PMS2P11Q13670 270 aa9.73□□□□□ -0.85
DNMT3A-214ENST00000491288 FAM19A4Q96LR4 140 aa9.73□□□□□ -0.85
DNMT3A-214ENST00000491288 PYGO2Q9BRQ0 406 aa9.73□□□□□ -0.85
DNMT3A-214ENST00000491288 FAM74A7A6NL05 159 aa9.72□□□□□ -0.85
DNMT3A-214ENST00000491288 KLLNB2CW77 178 aa9.72□□□□□ -0.85
DNMT3A-214ENST00000491288 GGTLC3B5MD39 225 aa9.72□□□□□ -0.85
DNMT3A-214ENST00000491288 NKX2-5P52952 324 aaPredicted RBP9.72□□□□□ -0.85
DNMT3A-214ENST00000491288 NANOS2P60321 138 aaKnown RBP9.72□□□□□ -0.85
DNMT3A-214ENST00000491288 KIR3DS1Q14943 382 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms