RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SPRNQ5BIV9 151 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 C1orf185Q5T7R7 199 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 FAM104BQ5XKR9 115 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 LCN12Q6JVE5 192 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 RNASEKQ6P5S7 137 aaKnown RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 ZNF562Q6V9R5 426 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 LINC00322Q6ZN03 302 aaPredicted RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 Q6ZS92 163 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 FA2HQ7L5A8 372 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 ERASQ7Z444 233 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 PRNTQ86SH4 94 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 MOB3BQ86TA1 216 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 MTURNQ8N3F0 131 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 ZNF491Q8N8L2 437 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM75Q8N9X5 138 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 FER1L6-AS1Q8NA97 138 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 OR2K2Q8NGT1 345 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 FAM57AQ8TBR7 257 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 MYOZ3Q8TDC0 251 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 RNASE8Q8TDE3 154 aaKnown RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 BLNKQ8WV28 456 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 GTSF1Q8WW33 167 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 SRSF12Q8WXF0 261 aaKnown RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 H1FXQ92522 213 aaKnown RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 CCL17Q92583 94 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 RNASE6Q93091 150 aaKnown RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 LEAP2Q969E1 77 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 FAM122AQ96E09 287 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 ZNF414Q96IQ9 312 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 GUCD1Q96NT3 240 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 RCHY1Q96PM5 261 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 ASCL2Q99929 193 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 SLC25A39Q9BZJ4 359 aaPredicted RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM133Q9H2Q1 129 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 Q9H3A6 140 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 HIGD1BQ9P298 99 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 HHLA3Q9XRX5 114 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 CHTOPQ9Y3Y2 248 aaKnown RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 F11RQ9Y624 299 aaKnown RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 R4GN57 208 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 U3KQK5 164 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A0C4DFX4 3053 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 AGRNO00468 2067 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 HTTP42858 3142 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 LAMA2P24043 3122 aaKnown RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 IGLV7-46A0A075B6I9 117 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 LOC105371242A0A075B767 164 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 PPIAL4CA0A0B4J2A2 164 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 IGHV1-3A0A0C4DH29 117 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 IGHV1-24A0A0C4DH33 117 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A1W2PPI3 338 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 C7orf71A4D174 169 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 RBAKDNA6NC62 111 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 LINC01549A6NIU2 74 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 OOSP1A8MZH6 123 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 LY6LH3BQJ8 138 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 ATP5LO75964 103 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 GOSR1O95249 250 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 PPP1R17O96001 155 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 CA1P00915 261 aaPredicted RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 PPIAL4GP0DN37 164 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 IGHV1-8P0DP01 117 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 RPL7P18124 248 aaKnown RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 EVI2AP22794 236 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 COL8A2P25067 703 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 CKS2P33552 79 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 IFI27P40305 119 aaPredicted RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 ZNF138P52744 262 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 KRTAP10-12P60413 245 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 CCL8P80075 99 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 SRSF6Q13247 344 aaKnown RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 EBI3Q14213 229 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 LPAL2Q16609 132 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 KLK9Q2XQG4 91 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 DEFB109BQ30KR1 87 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 MAJINQ3KP22 176 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 TMEM155Q4W5P6 130 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 KLF17Q5JT82 389 aaPredicted RBP1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 FAM201AQ5SY85 155 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 UTF1Q5T230 341 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 HES3Q5TGS1 186 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 HCP5Q6MZN7 132 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 UNQ5815/PRO19632Q6UWF5 114 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 LYZL1Q6UWQ5 148 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 LYPD2Q6UXB3 125 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 ZNF841Q6ZN19 808 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 FOXI2Q6ZQN5 318 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 NEGR1Q7Z3B1 354 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 AMN1Q8IY45 258 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 ATOH7Q8N100 152 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 ORMDL3Q8N138 153 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 TTC9CQ8N5M4 171 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 LY6G5BQ8NDX9 201 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 NPBQ8NG41 125 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 OR11H6Q8NGC7 330 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 OR5A1Q8NGJ0 315 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 IFI27L1Q96BM0 104 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 SGK494Q96LW2 274 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 LINC00477Q96M19 166 aa1.57□□□□□ -2.16
SNRNP40-207ENST00000491106 PRELID3AQ96N28 172 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms