RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 RCHY1Q96PM5 261 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 SMIM7Q9BQ49 75 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 TCEAL7Q9BRU2 100 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 DERL1Q9BUN8 251 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 PARLQ9H300 379 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 EPDR1Q9UM22 224 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 TRAV8-2A0A0B4J237 113 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 ZNF727A8MUV8 499 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 C3orf84H3BNL1 204 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 IGLV1-51P01701 117 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 HOXA5P20719 270 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 MEOX2P50222 304 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 PSG9Q00887 426 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 IGFL4Q6B9Z1 124 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 ADAMTSL5Q6ZMM2 481 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 SVBPQ8N300 66 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 C5orf17Q8NAS9 161 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 HIST1H2BAQ96A08 127 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 NEU1Q99519 415 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 NIPSNAP3BQ9BS92 247 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 SDF2L1Q9HCN8 221 aa5.65□□□□□ -1.5
CLDN1-202ENST00000490800 ZNF331Q9NQX6 463 aaPredicted RBP5.65□□□□□ -1.5
CLDN1-202ENST00000490800 SORL1Q92673 2214 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 TRBV20OR9-2A0A075B6H5 130 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 HELTA6NFD8 242 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 M0R3E3 92 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 SOCS3O14543 225 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 SCO1O75880 301 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 SNAPINO95295 136 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 TCRAP04437 139 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 CSN3P07498 182 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 FOLR2P14207 255 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 CBLN1P23435 193 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 HLA-DMBP28068 263 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 BMI1P35226 326 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 AKR1C3P42330 323 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 RPL35P42766 123 aaKnown RBP5.64□□□□□ -1.51
CLDN1-202ENST00000490800 TMEM241Q24JQ0 296 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 Q6ZSN1 163 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 TCF24Q7RTU0 167 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 OR9G4Q8NGQ1 327 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 CMTM2Q8TAZ6 248 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 TVP23CQ96ET8 276 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 LINC00479Q96M42 142 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 SLC50A1Q9BRV3 221 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 ATG101Q9BSB4 218 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 AAMDCQ9H7C9 122 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 FAM30AQ9NZY2 134 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 NAT8Q9UHE5 227 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 RPH3ALQ9UNE2 315 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 SELENOKQ9Y6D0 94 aa5.64□□□□□ -1.51
CLDN1-202ENST00000490800 TRAV34A0A0B4J273 112 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 C9JCJ5 164 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 DIRC3C9JPN6 131 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 M0R036 132 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 IGHV4-30-4P0DP06 118 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 PRB4P10163 310 aaPredicted RBP5.63□□□□□ -1.51
CLDN1-202ENST00000490800 GCSHP23434 173 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 CNN1P51911 297 aaKnown RBP5.63□□□□□ -1.51
CLDN1-202ENST00000490800 PTTG1IPP53801 180 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 TAS2R60P59551 318 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 RPL23P62829 140 aaKnown RBP5.63□□□□□ -1.51
CLDN1-202ENST00000490800 TMEM183BQ1AE95 376 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 CENPWQ5EE01 88 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 CASC10Q5T4H9 136 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 GOLT1AQ6ZVE7 132 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 RNF182Q8N6D2 247 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 ARL6IP6Q8N6S5 226 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 MUC7Q8TAX7 377 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 IGF2BP2-AS1Q96M15 143 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 PEMTQ9UBM1 199 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 MLXQ9UH92 298 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 KLF12Q9Y4X4 402 aa5.63□□□□□ -1.51
CLDN1-202ENST00000490800 SACSQ9NZJ4 4579 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 TRBV6-1A0A0K0K1D8 114 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 C7orf77A4D0Y5 90 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 IZUMO1RA6ND01 250 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 PGPEP1LA6NFU8 196 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 ZNF705FA8MVS1 300 aaPredicted RBP5.62□□□□□ -1.51
CLDN1-202ENST00000490800 A8MZ25 164 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 PRAC2D3DTV9 90 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 ISLRO14498 428 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 IGLV2-11P01706 119 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 IGLV2-8P01709 118 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 S100A9P06702 114 aaKnown RBP5.62□□□□□ -1.51
CLDN1-202ENST00000490800 CSN1S1P47710 185 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 GNG4P50150 75 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 PNRC1Q12796 327 aaPredicted RBP5.62□□□□□ -1.51
CLDN1-202ENST00000490800 ADIRFQ15847 76 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 LCN12Q6JVE5 192 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 LINC01551Q86U37 167 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 OCC1Q8TAD7 63 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 MRPL53Q96EL3 112 aaKnown RBP5.62□□□□□ -1.51
CLDN1-202ENST00000490800 C20orf173Q96LM9 149 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 SGK494Q96LW2 274 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 TM2D3Q9BRN9 247 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 NRN1Q9NPD7 142 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 PRELID1Q9Y255 219 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 LY96Q9Y6Y9 160 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 STAB2Q8WWQ8 2551 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms