RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 MRAPQ8TCY5 172 aa11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 DMRT1Q9Y5R6 373 aa11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 IGHG2P01859 326 aa11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 C21orf62-AS1Q17RA5 79 aa11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 TCF23Q7RTU1 214 aa11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 LY6G5BQ8NDX9 201 aa11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 TMEM70Q9BUB7 260 aa11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 DNAJC9-AS1A6NH13 148 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 ATP5LO75964 103 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 PSMB2P49721 201 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 C2orf88Q9BSF0 95 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 APOC4P55056 127 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 CGB3P0DN86 165 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 CGB7P0DN87 165 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 A0A1B0GV90 55 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 C14orf178Q8N769 122 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 TMEM160Q9NX00 188 aa11.29□□□□□ -0.6
ARHGEF39-205ENST00000490638 CELSR3Q9NYQ7 3312 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 H3BRN7 92 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 K7EIM0 57 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 EVI2AP22794 236 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 THAP8Q8NA92 274 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 EML5Q05BV3 1969 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 LGALS3P17931 250 aaKnown RBP11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 VCX2Q9H322 139 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 IGLV11-55A0A075B6I3 123 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 TRAV12-2A0A075B6T6 113 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 CIRBPQ14011 172 aaKnown RBP11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 NUP210LQ5VU65 1888 aa11.28□□□□□ -0.6
ARHGEF39-205ENST00000490638 M0R143 59 aa11.27□□□□□ -0.6
ARHGEF39-205ENST00000490638 CDKN1BP46527 198 aa11.27□□□□□ -0.6
ARHGEF39-205ENST00000490638 Q86TA4 180 aa11.27□□□□□ -0.6
ARHGEF39-205ENST00000490638 ST6GALNAC6Q969X2 333 aa11.27□□□□□ -0.6
ARHGEF39-205ENST00000490638 CD5LO43866 347 aa11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 IGKV1-17P01599 117 aa11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 CRPP02741 224 aa11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 C9orf66Q5T8R8 295 aa11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 KRTAP10-9P60411 292 aa11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 DAD1P61803 113 aa11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 GFI1BQ5VTD9 330 aa11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 KLK9Q9UKQ9 250 aa11.27□□□□□ -0.61
ARHGEF39-205ENST00000490638 A6NDX4 124 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 F5H768 121 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 TMEM86BQ8N661 226 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 FOXC2Q99958 501 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 CITED2Q99967 270 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 FSTL3O95633 263 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 DDTP30046 118 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 PMCHL1Q16048 86 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 FAM19A2Q8N3H0 131 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 NXT2Q9NPJ8 142 aaKnown RBP11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 CYSLTR1Q9Y271 337 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 CENPEQ02224 2701 aa11.26□□□□□ -0.61
ARHGEF39-205ENST00000490638 NCR2O95944 276 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 CTSGP08311 255 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 SSBP2P81877 361 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 PRR20EP86478 221 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 PRR20CP86479 221 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 PRR20DP86480 221 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 PRR20BP86481 221 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 PRR20AP86496 221 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 OR11H2Q8NH07 326 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 TRANK1O15050 2925 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 A0A087WWL8 130 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 NDUFA3O95167 84 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 IL15RAQ13261 267 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 ZNF25P17030 456 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 CFHR3Q02985 330 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 DPH3P1Q9H4G8 78 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 GP9P14770 177 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 PRR31Q5SQ13 230 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 SPAG8Q99932 426 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF39-205ENST00000490638 F6UB75 175 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 I3L2K1 104 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 RPL13AP40429 203 aaKnown RBP11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 IGHV4OR15-8A0A075B7B6 117 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 A0A087WW49 117 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 PROP1O75360 226 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 SRSF1Q07955 248 aaKnown RBP eCLIP11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 RNF151Q2KHN1 245 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 VGLL1Q99990 258 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 SLC25A2Q9BXI2 301 aa11.24□□□□□ -0.61
ARHGEF39-205ENST00000490638 GGTLC3B5MD39 225 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 IGHV1OR15-1A0A075B7D0 117 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 LY6G6DO95868 133 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 GCSHP23434 173 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 UTF1Q5T230 341 aa11.23□□□□□ -0.61
ARHGEF39-205ENST00000490638 C5orf30Q96GV9 206 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms