RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 H3BNG1 76 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 ZNF253O75346 499 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 DEFB130BP0DP73 79 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 DEFB130AP0DP74 79 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 GATA2P23769 480 aaPredicted RBP4.99□□□□□ -1.61
COL9A1-209ENST00000489861 BTCP35070 178 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 DEFA1P59665 94 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 DEFA3P59666 94 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 ERVFC1-1P60608 527 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 S100A10P60903 97 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 BAXQ07812 192 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 CHAC2Q8WUX2 184 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 ODF3Q96PU9 254 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 KRTAP4-12Q9BQ66 201 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 LYRM2Q9NU23 88 aaPredicted RBP4.99□□□□□ -1.61
COL9A1-209ENST00000489861 PRELID1Q9Y255 219 aa4.99□□□□□ -1.61
COL9A1-209ENST00000489861 A0A087WTM6 91 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 C17orf112F2Z3M2 114 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 F6UB75 175 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 M0R2Z0 102 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 PLA2G10O15496 165 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 CXCL3P19876 107 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 LEPP41159 167 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 RPL29P47914 159 aaKnown RBP4.98□□□□□ -1.61
COL9A1-209ENST00000489861 ASAH1Q13510 395 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 AMTNQ6UX39 209 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 NRARPQ7Z6K4 114 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 ZNF680Q8NEM1 530 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 RPUSD4Q96CM3 377 aaKnown RBP4.98□□□□□ -1.61
COL9A1-209ENST00000489861 GNPNAT1Q96EK6 184 aaPredicted RBP4.98□□□□□ -1.61
COL9A1-209ENST00000489861 MRPL53Q96EL3 112 aaKnown RBP4.98□□□□□ -1.61
COL9A1-209ENST00000489861 UHRF2Q96PU4 802 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 PYGO2Q9BRQ0 406 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 ZNF331Q9NQX6 463 aaPredicted RBP4.98□□□□□ -1.61
COL9A1-209ENST00000489861 WDR83OSQ9Y284 106 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 TNFRSF18Q9Y5U5 241 aa4.98□□□□□ -1.61
COL9A1-209ENST00000489861 LPAP08519 4548 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 ZNF705GA8MUZ8 300 aaPredicted RBP4.97□□□□□ -1.61
COL9A1-209ENST00000489861 E5RGE8 158 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 CCSO14618 274 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 M6PRP20645 277 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 SLAQ13239 276 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 PDE6HQ13956 83 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 VWC2Q2TAL6 325 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 TMEM182Q6ZP80 229 aaPredicted RBP4.97□□□□□ -1.61
COL9A1-209ENST00000489861 BAP18Q8IXM2 172 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 RNF182Q8N6D2 247 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 C20orf173Q96LM9 149 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 MGST2Q99735 147 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 SEC22CQ9BRL7 303 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 NMES1Q9C002 83 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 AAMDCQ9H7C9 122 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 SLC39A9Q9NUM3 307 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 TIMM9Q9Y5J7 89 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
COL9A1-209ENST00000489861 TRAV8-2A0A0B4J237 113 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 UBE2L5PA0A1B0GUS4 154 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 UPK1BO75841 260 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 CCNKO75909 580 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 CST7O76096 145 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 HIST1H1EP10412 219 aaKnown RBP4.96□□□□□ -1.62
COL9A1-209ENST00000489861 HTN1P15515 57 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 FGF7P21781 194 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 RAB32Q13637 225 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 KIR3DS1Q14943 382 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 PATE2Q6UY27 113 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 TMEM252Q8N6L7 170 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 RXFP4Q8TDU9 374 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 RNF141Q8WVD5 230 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 LINC00477Q96M19 166 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 UPK3BQ9BT76 320 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 MRPL32Q9BYC8 188 aaKnown RBP4.96□□□□□ -1.62
COL9A1-209ENST00000489861 BATF3Q9NR55 127 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 TMEM14CQ9P0S9 112 aa4.96□□□□□ -1.62
COL9A1-209ENST00000489861 TRAV12-2A0A075B6T6 113 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 TRAV9-2A0A087WT02 112 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 FAM24AA6NFZ4 105 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 K7EP13 123 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 MRPS12O15235 138 aaKnown RBP4.95□□□□□ -1.62
COL9A1-209ENST00000489861 CRXO43186 299 aaPredicted RBP4.95□□□□□ -1.62
COL9A1-209ENST00000489861 SLC25A5P05141 298 aaKnown RBP4.95□□□□□ -1.62
COL9A1-209ENST00000489861 NMBP08949 121 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 IGLC2P0DOY2 106 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 TAS2R45P59539 299 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 DEFB1P60022 68 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 ARL16Q0P5N6 197 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 OR5I1Q13606 314 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 OPCMLQ14982 345 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 C21orf62-AS1Q17RA5 79 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 RNASE8Q8TDE3 154 aaKnown RBP4.95□□□□□ -1.62
COL9A1-209ENST00000489861 TMEM37Q8WXS4 190 aa4.95□□□□□ -1.62
COL9A1-209ENST00000489861 NOP10Q9NPE3 64 aaKnown RBP4.95□□□□□ -1.62
COL9A1-209ENST00000489861 TRGV2A0A075B6R0 118 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 INMT-MINDY4F8WBC2 141 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 SSNA1O43805 119 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 CSN1S1P47710 185 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 DAZ2Q13117 558 aaKnown RBP4.94□□□□□ -1.62
COL9A1-209ENST00000489861 FAM74A1Q5RGS3 127 aa4.94□□□□□ -1.62
COL9A1-209ENST00000489861 TMEM78Q5T7P6 136 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms