RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 C21orf62Q9NYP8 219 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 PROCRQ9UNN8 238 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 HIGD1AQ9Y241 93 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 PCSK5Q92824 1860 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 ZNF292O60281 2723 aa3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 KMT2BQ9UMN6 2715 aaPredicted RBP3.75□□□□□ -1.81
SNRNP40-206ENST00000489853 TECTAO75443 2155 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 TRAV2A0A0B4J234 112 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 INS-IGF2F8WCM5 200 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 M0R2P5 195 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 NPFFO15130 113 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 SLC25A20O43772 301 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 NDUFA7O95182 113 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 RPL7P18124 248 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 RPL13AP40429 203 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 SUB1P53999 127 aaKnown RBP eCLIP3.74□□□□□ -1.813e-10■■■□□ 14.8
SNRNP40-206ENST00000489853 HES1Q14469 280 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 RPL39P5Q59GN2 51 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 LYZL1Q6UWQ5 148 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 FAM19A5Q7Z5A7 132 aaPredicted RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 PRNTQ86SH4 94 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 WDR86Q86TI4 376 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 AMN1Q8IY45 258 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 ZCCHC24Q8N2G6 241 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 THAP8Q8NA92 274 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 FAM57AQ8TBR7 257 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 MYOZ3Q8TDC0 251 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 BAALCQ8WXS3 180 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 FLYWCH2Q96CP2 140 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 MRPL35Q9NZE8 188 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 GNG12Q9UBI6 72 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 FZR1Q9UM11 496 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 PTPRBP23467 1997 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 TNRC6BQ9UPQ9 1833 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 DYSFO75923 2080 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 TMSB15BA0A087X1C1 80 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 LGALS1P09382 135 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 CD7P09564 240 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 ERHP84090 104 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 C17orf82Q86X59 251 aaPredicted RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 NDUFA11Q86Y39 141 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 C11orf53Q8IXP5 236 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 C3orf22Q8N5N4 141 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 C11orf44Q8N8P7 122 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 OR4C13Q8NGP0 309 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 NPIPB3Q92617 1050 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 TMEM101Q96IK0 257 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 MRPL20Q9BYC9 149 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 CALYQ9NYX4 217 aa3.74□□□□□ -1.81
SNRNP40-206ENST00000489853 CACNA1HO95180 2353 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 ZDBF2Q9HCK1 2354 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 CFAP47Q6ZTR5 3102 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 IGKV1D-37A0A075B6S9 117 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 IGHV3OR15-7A0A075B7D8 119 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 TRAV8-1A0A0A6YYK1 113 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 TRAV12-1A0A0B4J245 112 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 TRBV7-7A0A0K0K1E9 115 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 LOC107984640A0A0U1RRK4 108 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 C10orf142B7Z368 130 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 H7C1H1 209 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 CXCL13O43927 109 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 MRPL33O75394 65 aaKnown RBP3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 ORM2P19652 201 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 B3GALT5-AS1P59052 145 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 SRSF9Q13242 221 aaKnown RBP eCLIP3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 Q8N8P6 123 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 TMEM75Q8N9X5 138 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 PRSS33Q8NF86 280 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 TIMD4Q96H15 378 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 PRADC1Q9BSG0 188 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 CHCHD5Q9BSY4 110 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 IMUPQ9GZP8 106 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 PROK2Q9HC23 129 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 TMEM14CQ9P0S9 112 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 EPG5Q9HCE0 2579 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 MYO7AQ13402 2215 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 KNL1Q8NG31 2342 aa3.73□□□□□ -1.81
SNRNP40-206ENST00000489853 KNTC1P50748 2209 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 IGKV3D-15A0A087WSY6 115 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 FAM240AA0A1B0GVK7 77 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 ZNF503-AS2A6NEH8 195 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 LGALS9O00182 355 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 TIMM23O14925 209 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 UQCRQO14949 82 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 ZNHIT1O43257 154 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 GP9P14770 177 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 HLA-DMBP28068 263 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 CRIP1P50238 77 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 MFAP4P55083 255 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 LOXL3P58215 753 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 HERVK_113P63121 156 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 TNFAIP6P98066 277 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 TCF15Q12870 199 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 UTF1Q5T230 341 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 HES3Q5TGS1 186 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 GOLT1AQ6ZVE7 132 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 GGNQ86UU5 652 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 TMEM219Q86XT9 240 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 ZNRF2Q8NHG8 242 aa3.72□□□□□ -1.81
SNRNP40-206ENST00000489853 MRAPQ8TCY5 172 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms