RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ZFAND1Q8TCF1 268 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 C7orf33Q8WU49 177 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 UBE2WQ96B02 151 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 FAM19A4Q96LR4 140 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 C2orf50Q96LR7 162 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 PXMP4Q9Y6I8 212 aa9.44□□□□□ -0.9
UFD1-209ENST00000489406 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
UFD1-209ENST00000489406 PATE2Q6UY27 113 aa9.43□□□□□ -0.9
UFD1-209ENST00000489406 LINC00477Q96M19 166 aa9.43□□□□□ -0.9
UFD1-209ENST00000489406 VAX2Q9UIW0 290 aa9.43□□□□□ -0.9
UFD1-209ENST00000489406 KLK12Q9UKR0 248 aa9.43□□□□□ -0.9
UFD1-209ENST00000489406 PRSS1P07477 247 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 OR10J4P0C629 311 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 IAPPP10997 89 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 PLP1P60201 277 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 MUC21Q5SSG8 566 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 SPINK6Q6UWN8 80 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 SPXQ9BT56 116 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 ARL6Q9H0F7 186 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 AGPAT4-IT1Q9H0P7 198 aa9.42□□□□□ -0.9
UFD1-209ENST00000489406 USP17L23D6RBM5 183 aa9.41□□□□□ -0.9
UFD1-209ENST00000489406 TNFAIP8O95379 198 aa9.41□□□□□ -0.9
UFD1-209ENST00000489406 UBE2NLQ5JXB2 153 aa9.41□□□□□ -0.9
UFD1-209ENST00000489406 S100A7AQ86SG5 101 aa9.41□□□□□ -0.9
UFD1-209ENST00000489406 MARCH1Q8TCQ1 289 aa9.41□□□□□ -0.9
UFD1-209ENST00000489406 SAT2Q96F10 170 aaPredicted RBP9.41□□□□□ -0.9
UFD1-209ENST00000489406 ARV1Q9H2C2 271 aa9.41□□□□□ -0.9
UFD1-209ENST00000489406 NAA60Q9H7X0 242 aa9.41□□□□□ -0.9
UFD1-209ENST00000489406 PRSS46E5RG02 174 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 H3BQ15 152 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 CHTF8P0CG12 524 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 CRISP2P16562 243 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 CCR6P51684 374 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 SMCO1Q147U7 214 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 PRR4Q16378 134 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 BPIFA4PQ86YQ2 179 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 ZFAND2AQ8N6M9 145 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 GTSF1Q8WW33 167 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
UFD1-209ENST00000489406 M0R3E3 92 aa9.39□□□□□ -0.91
UFD1-209ENST00000489406 RHOHQ15669 191 aa9.39□□□□□ -0.91
UFD1-209ENST00000489406 RNASE10Q5GAN6 216 aaKnown RBP9.39□□□□□ -0.91
UFD1-209ENST00000489406 SAMD12Q8N8I0 201 aa9.39□□□□□ -0.91
UFD1-209ENST00000489406 RNF185Q96GF1 192 aa9.39□□□□□ -0.91
UFD1-209ENST00000489406 SRRQ9GZT4 340 aa9.39□□□□□ -0.91
UFD1-209ENST00000489406 RNF24Q9Y225 148 aa9.39□□□□□ -0.91
UFD1-209ENST00000489406 URGCP-MRPS24S4R325 110 aa9.39□□□□□ -0.91
UFD1-209ENST00000489406 SMCO3A2RU48 225 aa9.38□□□□□ -0.91
UFD1-209ENST00000489406 RPL19P84098 196 aaKnown RBP9.38□□□□□ -0.91
UFD1-209ENST00000489406 TMEM183BQ1AE95 376 aa9.38□□□□□ -0.91
UFD1-209ENST00000489406 ATRAIDQ6UW56 229 aa9.38□□□□□ -0.91
UFD1-209ENST00000489406 LINC00305Q7Z4B0 112 aa9.38□□□□□ -0.91
UFD1-209ENST00000489406 NIT1Q86X76 327 aa9.38□□□□□ -0.91
UFD1-209ENST00000489406 SNX29P2Q8IUI4 249 aa9.38□□□□□ -0.91
UFD1-209ENST00000489406 TMEM183AQ8IXX5 376 aa9.38□□□□□ -0.91
UFD1-209ENST00000489406 FBLL1A6NHQ2 334 aaKnown RBP9.37□□□□□ -0.91
UFD1-209ENST00000489406 H7C1H1 209 aa9.37□□□□□ -0.91
UFD1-209ENST00000489406 TAAR5O14804 337 aa9.37□□□□□ -0.91
UFD1-209ENST00000489406 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
UFD1-209ENST00000489406 IGLC2P0DOY2 106 aa9.37□□□□□ -0.91
UFD1-209ENST00000489406 AKR1C4P17516 323 aa9.37□□□□□ -0.91
UFD1-209ENST00000489406 SCGB2B2Q4G0G5 96 aa9.37□□□□□ -0.91
UFD1-209ENST00000489406 C4orf46Q504U0 113 aa9.37□□□□□ -0.91
UFD1-209ENST00000489406 TERB2Q8NHR7 220 aa9.37□□□□□ -0.91
UFD1-209ENST00000489406 RTBDNQ9BSG5 229 aaPredicted RBP9.37□□□□□ -0.91
UFD1-209ENST00000489406 IGHV3-73A0A0B4J1V6 119 aa9.36□□□□□ -0.91
UFD1-209ENST00000489406 TRBV6-4A0A1B0GX49 114 aa9.36□□□□□ -0.91
UFD1-209ENST00000489406 CD3DP04234 171 aa9.36□□□□□ -0.91
UFD1-209ENST00000489406 NMBP08949 121 aa9.36□□□□□ -0.91
UFD1-209ENST00000489406 UBE2MP61081 183 aaKnown RBP9.36□□□□□ -0.91
UFD1-209ENST00000489406 POLR2GP62487 172 aaKnown RBP eCLIP9.36□□□□□ -0.91
UFD1-209ENST00000489406 C1orf43Q9BWL3 253 aa9.36□□□□□ -0.91
UFD1-209ENST00000489406 SH3BGRL3Q9H299 93 aa9.36□□□□□ -0.91
UFD1-209ENST00000489406 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
UFD1-209ENST00000489406 C14orf166Q9Y224 244 aaKnown RBP9.36□□□□□ -0.91
UFD1-209ENST00000489406 ANKRD65E5RJM6 399 aa9.35□□□□□ -0.91
UFD1-209ENST00000489406 M0R2P5 195 aa9.35□□□□□ -0.91
UFD1-209ENST00000489406 ZNF253O75346 499 aa9.35□□□□□ -0.91
UFD1-209ENST00000489406 SELENOTP62341 195 aa9.35□□□□□ -0.91
UFD1-209ENST00000489406 BAK1Q16611 211 aa9.35□□□□□ -0.91
UFD1-209ENST00000489406 LYZL2Q7Z4W2 148 aa9.35□□□□□ -0.91
UFD1-209ENST00000489406 SPACA4Q8TDM5 124 aa9.35□□□□□ -0.91
UFD1-209ENST00000489406 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
UFD1-209ENST00000489406 HLA-DQA1P01909 254 aa9.34□□□□□ -0.91
UFD1-209ENST00000489406 SRSF9Q13242 221 aaKnown RBP eCLIP9.34□□□□□ -0.91
UFD1-209ENST00000489406 RAB31Q13636 194 aa9.34□□□□□ -0.91
UFD1-209ENST00000489406 TRGV11A0A075B6L2 103 aa9.33□□□□□ -0.92
UFD1-209ENST00000489406 LOC100506127A0A0U1RQW1 187 aa9.33□□□□□ -0.92
UFD1-209ENST00000489406 C5orf51A6NDU8 294 aa9.33□□□□□ -0.92
UFD1-209ENST00000489406 KRTAP9-7A8MTY7 169 aa9.33□□□□□ -0.92
UFD1-209ENST00000489406 OR52I2Q8NH67 350 aa9.33□□□□□ -0.92
UFD1-209ENST00000489406 YIPF6Q96EC8 236 aa9.33□□□□□ -0.92
UFD1-209ENST00000489406 MRPL53Q96EL3 112 aaKnown RBP9.33□□□□□ -0.92
UFD1-209ENST00000489406 IGKV2-40A0A087WW87 121 aaPredicted RBP9.32□□□□□ -0.92
UFD1-209ENST00000489406 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
UFD1-209ENST00000489406 IGKV2D-40P01614 121 aaPredicted RBP9.32□□□□□ -0.92
UFD1-209ENST00000489406 RPP30P78346 268 aaKnown RBP9.32□□□□□ -0.92
UFD1-209ENST00000489406 Q0VG73 95 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms