RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 SIGLEC1Q9BZZ2 1709 aa2.79□□□□□ -1.96
VPS8-224ENST00000488255 PIK3C2AO00443 1686 aa2.79□□□□□ -1.96
VPS8-224ENST00000488255 ARHGEF12Q9NZN5 1544 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 CDK12Q9NYV4 1490 aaPredicted RBP2.78□□□□□ -1.96
VPS8-224ENST00000488255 CHD3Q12873 2000 aaKnown RBP2.78□□□□□ -1.96
VPS8-224ENST00000488255 MIA3Q5JRA6 1907 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 IGLV1-50A0A075B6I6 118 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 SYS1-DBNDD2H3BUS1 97 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 J3QLW9 94 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 SIX6O95475 246 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 IGKV1-5P01602 117 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 CHTF8P0CG12 524 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 NPPCP23582 126 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 ELOBQ15370 118 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 RSPO1Q2MKA7 263 aaPredicted RBP2.78□□□□□ -1.96
VPS8-224ENST00000488255 MPV17L2Q567V2 206 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 CASC10Q5T4H9 136 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 CMTM2Q8TAZ6 248 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 STAG3L4Q8TBR4 150 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 DYNLRB2Q8TF09 96 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 FGF13Q92913 245 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 DIRC1Q969H9 104 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 DPH3P1Q9H4G8 78 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 CROCC2H7BZ55 1655 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 PLXNC1O60486 1568 aa2.78□□□□□ -1.96
VPS8-224ENST00000488255 C2orf16Q68DN1 1984 aa2.78□□□□□ -1.97
VPS8-224ENST00000488255 PPLO60437 1756 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 DOCK6Q96HP0 2047 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 IGLV4-69A0A075B6H9 119 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 TRAV2A0A0B4J234 112 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 OR1I1O60431 355 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 CREBL2O60519 120 aaPredicted RBP2.77□□□□□ -1.97
VPS8-224ENST00000488255 WISP3O95389 354 aaPredicted RBP2.77□□□□□ -1.97
VPS8-224ENST00000488255 BTCP35070 178 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 FUSP35637 526 aaKnown RBP eCLIP2.77□□□□□ -1.97
VPS8-224ENST00000488255 POLR2IP36954 125 aaKnown RBP2.77□□□□□ -1.97
VPS8-224ENST00000488255 SSR2P43308 183 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 DAPP51397 102 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 BLCAPP62952 87 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 RPL7L1Q6DKI1 246 aaKnown RBP2.77□□□□□ -1.97
VPS8-224ENST00000488255 LAIR2Q6ISS4 152 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 SERP2Q8N6R1 65 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 FAM213BQ8TBF2 198 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 DCANP1Q8TF63 244 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 TVP23CQ96ET8 276 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 DYNLRB1Q9NP97 96 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 LSM2Q9Y333 95 aaKnown RBP2.77□□□□□ -1.97
VPS8-224ENST00000488255 MYH7BA7E2Y1 1941 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 TCHHQ07283 1943 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 DLC1Q96QB1 1528 aa2.77□□□□□ -1.97
VPS8-224ENST00000488255 CRB1P82279 1406 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 MARF1Q9Y4F3 1742 aaKnown RBP2.76□□□□□ -1.97
VPS8-224ENST00000488255 TNRC6AQ8NDV7 1962 aaKnown RBP2.76□□□□□ -1.97
VPS8-224ENST00000488255 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.76□□□□□ -1.97
VPS8-224ENST00000488255 IGKV1-27A0A075B6S5 117 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 IGHV3-72A0A0B4J1Y9 119 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 IGHV1OR15-9A0A0B4J2B8 117 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 IGKV1-8A0A0C4DH67 115 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 A0A1W2PP18 115 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 RBAKDNA6NC62 111 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 H3BUT2 72 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 TIMM17BO60830 172 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 CXCL8P10145 99 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 CD28P10747 220 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 ADCYAP1P18509 176 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 COL8A2P25067 703 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 MPV17P39210 176 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 MPV17LQ2QL34 196 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 ETDBQ3ZM63 59 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 PYDC2Q56P42 97 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 SPANXN1Q5VSR9 72 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 LINC00471Q8N535 108 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 DAND5Q8N907 189 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 OR8B2Q96RD0 313 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 CHCHD7Q9BUK0 85 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 ZNF835Q9Y2P0 537 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 KCPQ6ZWJ8 1503 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 ARAP3Q8WWN8 1544 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 C10orf71Q711Q0 1435 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 CAMTA1Q9Y6Y1 1673 aa2.76□□□□□ -1.97
VPS8-224ENST00000488255 CFAP74Q9C0B2 1584 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 LTN1O94822 1766 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 ADAMTSL1Q8N6G6 1762 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 A0A0D9SEW6 157 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 BUB1B-PAK6H3BSN5 160 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 CRISP3P54108 245 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 EIF4EBP1Q13541 118 aaPredicted RBP2.75□□□□□ -1.97
VPS8-224ENST00000488255 ZNF791Q3KP31 576 aaPredicted RBP2.75□□□□□ -1.97
VPS8-224ENST00000488255 NMSQ5H8A3 153 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 XAF1Q6GPH4 301 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 SMIM7Q9BQ49 75 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 SCRT1Q9BWW7 348 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 C16orf95Q9H693 158 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 KNDC1Q76NI1 1749 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 LRRIQ1Q96JM4 1722 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 FER1L6Q2WGJ9 1857 aa2.75□□□□□ -1.97
VPS8-224ENST00000488255 LRRC7Q96NW7 1537 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 SPHKAPQ2M3C7 1700 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 ABCA3Q99758 1704 aa2.74□□□□□ -1.97
VPS8-224ENST00000488255 ATP10BO94823 1461 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms