RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 PPP1R14DQ9NXH3 145 aa12.38□□□□□ -0.43
SHROOM1-205ENST00000488072 TRAV8-1A0A0A6YYK1 113 aa12.37□□□□□ -0.43
SHROOM1-205ENST00000488072 ZNF705GA8MUZ8 300 aaPredicted RBP12.37□□□□□ -0.43
SHROOM1-205ENST00000488072 SUMO1P63165 101 aaKnown RBP12.37□□□□□ -0.43
SHROOM1-205ENST00000488072 CCL20P78556 96 aa12.37□□□□□ -0.43
SHROOM1-205ENST00000488072 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
SHROOM1-205ENST00000488072 ZNF705AQ6ZN79 300 aaPredicted RBP12.37□□□□□ -0.43
SHROOM1-205ENST00000488072 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
SHROOM1-205ENST00000488072 SLC25A5P05141 298 aaKnown RBP12.36□□□□□ -0.43
SHROOM1-205ENST00000488072 AZU1P20160 251 aa12.36□□□□□ -0.43
SHROOM1-205ENST00000488072 GOLT1AQ6ZVE7 132 aa12.36□□□□□ -0.43
SHROOM1-205ENST00000488072 LYPD1Q8N2G4 141 aa12.36□□□□□ -0.43
SHROOM1-205ENST00000488072 SFT2D1Q8WV19 159 aa12.36□□□□□ -0.43
SHROOM1-205ENST00000488072 FAM19A4Q96LR4 140 aa12.36□□□□□ -0.43
SHROOM1-205ENST00000488072 C1QTNF4Q9BXJ3 329 aa12.36□□□□□ -0.43
SHROOM1-205ENST00000488072 EIF5AP63241 154 aaKnown RBP12.35□□□□□ -0.43
SHROOM1-205ENST00000488072 BTN1A1Q13410 526 aa12.35□□□□□ -0.43
SHROOM1-205ENST00000488072 C9orf47Q6ZRZ4 202 aa12.35□□□□□ -0.43
SHROOM1-205ENST00000488072 MBD3L1Q8WWY6 194 aa12.35□□□□□ -0.43
SHROOM1-205ENST00000488072 TMEM167BQ9NRX6 74 aa12.35□□□□□ -0.43
SHROOM1-205ENST00000488072 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
SHROOM1-205ENST00000488072 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 FAM74A7A6NL05 159 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 INSP01308 110 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 CDKN1BP46527 198 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 CSN1S1P47710 185 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 EMP1P54849 157 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 ZNF767PQ75MW2 155 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 ZFAND2AQ8N6M9 145 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 TVP23CQ96ET8 276 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 LINC00479Q96M42 142 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 ZNF492Q9P255 531 aa12.34□□□□□ -0.43
SHROOM1-205ENST00000488072 UMAD1C9J7I0 102 aa12.33□□□□□ -0.44
SHROOM1-205ENST00000488072 HTN1P15515 57 aa12.33□□□□□ -0.44
SHROOM1-205ENST00000488072 RNASE4P34096 147 aaKnown RBP12.33□□□□□ -0.44
SHROOM1-205ENST00000488072 ATP5G3P48201 142 aa12.33□□□□□ -0.44
SHROOM1-205ENST00000488072 NANOS2P60321 138 aaKnown RBP12.33□□□□□ -0.44
SHROOM1-205ENST00000488072 ALKAL2Q6UX46 152 aa12.33□□□□□ -0.44
SHROOM1-205ENST00000488072 CMTM2Q8TAZ6 248 aa12.33□□□□□ -0.44
SHROOM1-205ENST00000488072 LINC00477Q96M19 166 aa12.33□□□□□ -0.44
SHROOM1-205ENST00000488072 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
SHROOM1-205ENST00000488072 TRAV34A0A0B4J273 112 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 TCRAP04437 139 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 H2AFB1P0C5Y9 115 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 LEPP41159 167 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 SULT1A2P50226 295 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 ZNF138P52744 262 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 PMS2P11Q13670 270 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 TMEM78Q5T7P6 136 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 IL17DQ8TAD2 202 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 MUC7Q8TAX7 377 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 LINC01587Q99440 93 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 TMEM208Q9BTX3 173 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 EPDR1Q9UM22 224 aa12.32□□□□□ -0.44
SHROOM1-205ENST00000488072 PAGE4O60829 102 aa12.31□□□□□ -0.44
SHROOM1-205ENST00000488072 RXFP4Q8TDU9 374 aa12.31□□□□□ -0.44
SHROOM1-205ENST00000488072 STARD9Q9P2P6 4700 aa12.3□□□□□ -0.44
SHROOM1-205ENST00000488072 A0A1W2PRE2 83 aa12.3□□□□□ -0.44
SHROOM1-205ENST00000488072 KLLNB2CW77 178 aa12.3□□□□□ -0.44
SHROOM1-205ENST00000488072 F6UZH7 168 aa12.3□□□□□ -0.44
SHROOM1-205ENST00000488072 IGLV2-11P01706 119 aa12.3□□□□□ -0.44
SHROOM1-205ENST00000488072 AMBPP02760 352 aa12.3□□□□□ -0.44
SHROOM1-205ENST00000488072 MIFP14174 115 aa12.3□□□□□ -0.44
SHROOM1-205ENST00000488072 C5orf17Q8NAS9 161 aa12.3□□□□□ -0.44
SHROOM1-205ENST00000488072 ODF3Q96PU9 254 aa12.3□□□□□ -0.44
SHROOM1-205ENST00000488072 DYNC2H1Q8NCM8 4307 aaKnown RBP12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 LOC102723971A0A1B0GUV8 181 aa12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 RBAKDNA6NC62 111 aa12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 IFNA7P01567 189 aa12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 CRISP2P16562 243 aa12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 TSPOP30536 169 aa12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 CST9LP1Q5W188 147 aa12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 DPPA3Q6W0C5 159 aa12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 C8orf49Q96NF6 230 aa12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 NEU1Q99519 415 aa12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 C11orf68Q9H3H3 251 aaKnown RBP12.29□□□□□ -0.44
SHROOM1-205ENST00000488072 PLAC8L1A1L4L8 177 aa12.28□□□□□ -0.44
SHROOM1-205ENST00000488072 C7orf71A4D174 169 aa12.28□□□□□ -0.44
SHROOM1-205ENST00000488072 ZNF324O75467 553 aaPredicted RBP12.28□□□□□ -0.44
SHROOM1-205ENST00000488072 HBE1P02100 147 aa12.28□□□□□ -0.44
SHROOM1-205ENST00000488072 GPX1P07203 203 aa12.28□□□□□ -0.44
SHROOM1-205ENST00000488072 CCDC28AQ8IWP9 274 aa12.28□□□□□ -0.44
SHROOM1-205ENST00000488072 PCNPQ8WW12 178 aaKnown RBP12.28□□□□□ -0.44
SHROOM1-205ENST00000488072 CSMD3Q7Z407 3707 aa12.27□□□□□ -0.45
SHROOM1-205ENST00000488072 RRN3P1Q2M238 152 aa12.27□□□□□ -0.45
SHROOM1-205ENST00000488072 PRNTQ86SH4 94 aa12.27□□□□□ -0.45
SHROOM1-205ENST00000488072 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
SHROOM1-205ENST00000488072 PSG8Q9UQ74 426 aa12.27□□□□□ -0.45
SHROOM1-205ENST00000488072 PEX7O00628 323 aa12.26□□□□□ -0.45
SHROOM1-205ENST00000488072 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
SHROOM1-205ENST00000488072 MUC21Q5SSG8 566 aa12.26□□□□□ -0.45
SHROOM1-205ENST00000488072 CASC10Q5T4H9 136 aa12.26□□□□□ -0.45
SHROOM1-205ENST00000488072 EIF5AL1Q6IS14 154 aaKnown RBP12.26□□□□□ -0.45
SHROOM1-205ENST00000488072 C11orf45Q8TAV5 145 aa12.26□□□□□ -0.45
SHROOM1-205ENST00000488072 GNG13Q9P2W3 67 aa12.26□□□□□ -0.45
SHROOM1-205ENST00000488072 RAB5CP51148 216 aa12.25□□□□□ -0.45
SHROOM1-205ENST00000488072 TAS2R60P59551 318 aa12.25□□□□□ -0.45
SHROOM1-205ENST00000488072 C12orf74Q32Q52 190 aa12.25□□□□□ -0.45
SHROOM1-205ENST00000488072 FAM222AQ5U5X8 452 aa12.25□□□□□ -0.45
SHROOM1-205ENST00000488072 CYB561D1Q8N8Q1 229 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms