RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 C16orf54Q6UWD8 224 aa11.49□□□□□ -0.57
EPHA1-205ENST00000488068 H3BUA1 57 aa11.49□□□□□ -0.57
EPHA1-205ENST00000488068 SLC25A34Q6PIV7 304 aa11.49□□□□□ -0.57
EPHA1-205ENST00000488068 CLEC19AQ6UXS0 136 aa11.49□□□□□ -0.57
EPHA1-205ENST00000488068 LINC01356Q8N9X3 169 aa11.49□□□□□ -0.57
EPHA1-205ENST00000488068 NRGNQ92686 78 aa11.49□□□□□ -0.57
EPHA1-205ENST00000488068 VPS25Q9BRG1 176 aa11.49□□□□□ -0.57
EPHA1-205ENST00000488068 A0A087X0K7 114 aa11.49□□□□□ -0.57
EPHA1-205ENST00000488068 IGHG2P01859 326 aa11.49□□□□□ -0.57
EPHA1-205ENST00000488068 FOXA3P55318 350 aaPredicted RBP11.49□□□□□ -0.57
EPHA1-205ENST00000488068 CIARTQ8N365 385 aaPredicted RBP11.49□□□□□ -0.57
EPHA1-205ENST00000488068 A0A096LNT2 108 aa11.48□□□□□ -0.57
EPHA1-205ENST00000488068 H3BUX3 64 aa11.48□□□□□ -0.57
EPHA1-205ENST00000488068 COL8A1P27658 744 aa11.48□□□□□ -0.57
EPHA1-205ENST00000488068 FAM162BQ5T6X4 162 aa11.48□□□□□ -0.57
EPHA1-205ENST00000488068 SMAD5-AS1Q9Y6J3 95 aa11.48□□□□□ -0.57
EPHA1-205ENST00000488068 CBY3A6NI87 242 aa11.48□□□□□ -0.57
EPHA1-205ENST00000488068 HBBP68871 147 aa11.48□□□□□ -0.57
EPHA1-205ENST00000488068 TCF24Q7RTU0 167 aa11.48□□□□□ -0.57
EPHA1-205ENST00000488068 J3QLI3 93 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 BUB3O43684 328 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 LEPROTL1O95214 131 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 AMMECR1LQ6DCA0 310 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 C12orf54Q6X4T0 127 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 CHCHD1Q96BP2 118 aaKnown RBP11.47□□□□□ -0.57
EPHA1-205ENST00000488068 SPTAN1Q13813 2472 aaKnown RBP11.47□□□□□ -0.57
EPHA1-205ENST00000488068 M0R3E3 92 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 SMIM15Q7Z3B0 74 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 ZC2HC1AQ96GY0 325 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 SCRT2Q9NQ03 307 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 FLNCQ14315 2725 aa11.47□□□□□ -0.57
EPHA1-205ENST00000488068 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.57
EPHA1-205ENST00000488068 CLPSL1A2RUU4 121 aa11.46□□□□□ -0.57
EPHA1-205ENST00000488068 LY6EQ16553 131 aa11.46□□□□□ -0.57
EPHA1-205ENST00000488068 COX8CQ7Z4L0 72 aa11.46□□□□□ -0.57
EPHA1-205ENST00000488068 TMEM191AQ9H0A3 160 aa11.46□□□□□ -0.57
EPHA1-205ENST00000488068 AVPP01185 164 aa11.46□□□□□ -0.58
EPHA1-205ENST00000488068 TRGV3P03979 118 aa11.46□□□□□ -0.58
EPHA1-205ENST00000488068 GTSF1Q8WW33 167 aa11.46□□□□□ -0.58
EPHA1-205ENST00000488068 ASH1LQ9NR48 2969 aaKnown RBP11.46□□□□□ -0.58
EPHA1-205ENST00000488068 USMG5Q96IX5 58 aa11.45□□□□□ -0.58
EPHA1-205ENST00000488068 METTL26Q96S19 204 aa11.45□□□□□ -0.58
EPHA1-205ENST00000488068 ZNF580Q9UK33 172 aa11.45□□□□□ -0.58
EPHA1-205ENST00000488068 IGHV3-35A0A0C4DH35 117 aa11.45□□□□□ -0.58
EPHA1-205ENST00000488068 ZNF785A8K8V0 405 aa11.45□□□□□ -0.58
EPHA1-205ENST00000488068 HSBP1L1C9JCN9 74 aa11.45□□□□□ -0.58
EPHA1-205ENST00000488068 PPIFP30405 207 aaKnown RBP11.45□□□□□ -0.58
EPHA1-205ENST00000488068 SLC50A1Q9BRV3 221 aa11.44□□□□□ -0.58
EPHA1-205ENST00000488068 U3KQE9 123 aa11.44□□□□□ -0.58
EPHA1-205ENST00000488068 CHEK1O14757 476 aa11.44□□□□□ -0.58
EPHA1-205ENST00000488068 CD5LO43866 347 aa11.44□□□□□ -0.58
EPHA1-205ENST00000488068 LOXL1Q08397 574 aaPredicted RBP11.44□□□□□ -0.58
EPHA1-205ENST00000488068 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
EPHA1-205ENST00000488068 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
EPHA1-205ENST00000488068 MCRIP2Q9BUT9 160 aaKnown RBP11.43□□□□□ -0.58
EPHA1-205ENST00000488068 BEX4Q9NWD9 120 aaPredicted RBP11.43□□□□□ -0.58
EPHA1-205ENST00000488068 COL12A1Q99715 3063 aa11.43□□□□□ -0.58
EPHA1-205ENST00000488068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.43□□□□□ -0.58
EPHA1-205ENST00000488068 IGHV3OR16-8A0A075B7F1 116 aa11.43□□□□□ -0.58
EPHA1-205ENST00000488068 A1L4Q6 167 aa11.43□□□□□ -0.58
EPHA1-205ENST00000488068 HIST1H1AQ02539 215 aaPredicted RBP11.43□□□□□ -0.58
EPHA1-205ENST00000488068 LINC00527Q9UJ94 153 aa11.43□□□□□ -0.58
EPHA1-205ENST00000488068 GAGE12BA1L429 117 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 IGHG4P01861 327 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 PGLYRP4Q96LB8 373 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 Q71RC1 249 aaPredicted RBP11.42□□□□□ -0.58
EPHA1-205ENST00000488068 LRRC75A-AS1Q8N1F1 130 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 MAP1LC3CQ9BXW4 147 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 CSTL1Q9H114 145 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 MS4A6AQ9H2W1 248 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 RBAKDNA6NC62 111 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 HAX1O00165 279 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 OR5AL1P0C617 328 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 ARL3P36405 182 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 CRIP1P50238 77 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 Q6AWC8 147 aa11.42□□□□□ -0.58
EPHA1-205ENST00000488068 LOC102724200A0A096LPH7 203 aaPredicted RBP11.41□□□□□ -0.58
EPHA1-205ENST00000488068 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.41□□□□□ -0.58
EPHA1-205ENST00000488068 C8orf49Q96NF6 230 aa11.41□□□□□ -0.58
EPHA1-205ENST00000488068 UBR5O95071 2799 aaPredicted RBP11.41□□□□□ -0.58
EPHA1-205ENST00000488068 IGKV2-40A0A087WW87 121 aaPredicted RBP11.41□□□□□ -0.58
EPHA1-205ENST00000488068 K7ERU9 68 aa11.41□□□□□ -0.58
EPHA1-205ENST00000488068 IGKV2D-40P01614 121 aaPredicted RBP11.41□□□□□ -0.58
EPHA1-205ENST00000488068 ZNF138P52744 262 aa11.41□□□□□ -0.58
EPHA1-205ENST00000488068 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
EPHA1-205ENST00000488068 PRR25Q96S07 402 aa11.41□□□□□ -0.58
EPHA1-205ENST00000488068 NDFIP1Q9BT67 221 aa11.41□□□□□ -0.58
EPHA1-205ENST00000488068 PEF1Q9UBV8 284 aaKnown RBP11.41□□□□□ -0.58
EPHA1-205ENST00000488068 MYO18BQ8IUG5 2567 aa11.41□□□□□ -0.58
EPHA1-205ENST00000488068 H0Y8G0 127 aa11.4□□□□□ -0.58
EPHA1-205ENST00000488068 NDUFA4O00483 81 aa11.4□□□□□ -0.58
EPHA1-205ENST00000488068 IGLV1-40P01703 118 aa11.4□□□□□ -0.58
EPHA1-205ENST00000488068 BLCAPP62952 87 aa11.4□□□□□ -0.58
EPHA1-205ENST00000488068 FOXE3Q13461 319 aa11.4□□□□□ -0.58
EPHA1-205ENST00000488068 C2orf91Q6ZV80 131 aa11.4□□□□□ -0.58
EPHA1-205ENST00000488068 PMCHL2Q9BQD1 86 aa11.4□□□□□ -0.58
EPHA1-205ENST00000488068 A0A1B0GW15 77 aa11.4□□□□□ -0.58
EPHA1-205ENST00000488068 APOHP02749 345 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms