RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 BTF3L4Q96K17 158 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 HSPB9Q9BQS6 159 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 SULT4A1Q9BR01 284 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 PYGO2Q9BRQ0 406 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 HDHD3Q9BSH5 251 aaPredicted RBP2.27□□□□□ -2.05
GPNMB-212ENST00000487890 FAAP24Q9BTP7 215 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 KRTAP2-2Q9BYT5 123 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 SLC25A39Q9BZJ4 359 aaPredicted RBP2.27□□□□□ -2.05
GPNMB-212ENST00000487890 MAP1LC3BQ9GZQ8 125 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 LINC00574Q9H8X3 128 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 SCN3BQ9NY72 215 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF257Q9Y2Q1 563 aa2.27□□□□□ -2.05
GPNMB-212ENST00000487890 AGRNO00468 2067 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 A0A087WX48 190 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 LOC102724200A0A096LPH7 203 aaPredicted RBP2.26□□□□□ -2.05
GPNMB-212ENST00000487890 TRAV41A0A0B4J266 112 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 FAM236DA0A1B0GTK5 79 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 FAM240AA0A1B0GVK7 77 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 F6UZH7 168 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 G3V318 75 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 K7ERU9 68 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 M0R1X1 148 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 FABP7O15540 132 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 GABARAPO95166 117 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 CDS2O95674 445 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 APOA2P02652 100 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 C1QBP02746 253 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 SAA2P0DJI9 122 aaPredicted RBP2.26□□□□□ -2.05
GPNMB-212ENST00000487890 FAM236CP0DP71 79 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 CXCL3P19876 107 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 CNTFRP26992 372 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 S100A11P31949 105 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 CXCL5P42830 114 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 AQP4P55087 323 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 TPPP2P59282 170 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 DEFA1P59665 94 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 RPS25P62851 125 aaKnown RBP2.26□□□□□ -2.05
GPNMB-212ENST00000487890 NDPQ00604 133 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 MORN2Q502X0 79 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 RPL39P5Q59GN2 51 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 FAM162BQ5T6X4 162 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 SPATA31B1PQ5VZV4 182 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 CEMP1Q6PRD7 247 aaPredicted RBP2.26□□□□□ -2.05
GPNMB-212ENST00000487890 CAMK2N1Q7Z7J9 78 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 GAPTQ8N292 157 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 Q8N6K4 173 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 LINC00612Q8N6U2 182 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 WFDC9Q8NEX5 89 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 MRPL30Q8TCC3 161 aaKnown RBP2.26□□□□□ -2.05
GPNMB-212ENST00000487890 C4orf3Q8WVX3 66 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 ABHD14BQ96IU4 210 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 CYYR1Q96J86 154 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 SLC35E1Q96K37 410 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 DNAJC30Q96LL9 226 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF355PQ9NSJ1 428 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 DOK5Q9P104 306 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF230Q9UIE0 474 aaPredicted RBP2.26□□□□□ -2.05
GPNMB-212ENST00000487890 AK3Q9UIJ7 227 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 TPRKBQ9Y3C4 175 aa2.26□□□□□ -2.05
GPNMB-212ENST00000487890 LSM5Q9Y4Y9 91 aaKnown RBP2.26□□□□□ -2.05
GPNMB-212ENST00000487890 IGHV3OR16-9A0A0B4J2B5 98 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 LINC01619G3V211 115 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 J3QRK9 145 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 OVOL1O14753 267 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 SOCS1O15524 211 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 ARL6IP5O75915 188 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 IGHV3-11P01762 117 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 HLA-DRB1P01911 266 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 TRGV3P03979 118 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 PFN1P07737 140 aaKnown RBP2.25□□□□□ -2.05
GPNMB-212ENST00000487890 UCHL1P09936 223 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 APELAP0DMC3 54 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 SULT1A3P0DMM9 295 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 SULT1A4P0DMN0 295 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 CXCL2P19875 107 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 GADD45AP24522 165 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 MYL9P24844 172 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 PSMB9P28065 219 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF137PP52743 207 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 TAS2R46P59540 309 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 PKIAP61925 76 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 HLA-DRB3P79483 266 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 DEFA5Q01523 94 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 TMEM267Q0VDI3 215 aaPredicted RBP2.25□□□□□ -2.05
GPNMB-212ENST00000487890 EBI3Q14213 229 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 HMGN3Q15651 99 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 RTL8BQ17RB0 113 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 OCIAD2Q56VL3 154 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 LAIR2Q6ISS4 152 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 UNQ5815/PRO19632Q6UWF5 114 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 UBAC2Q8NBM4 344 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 ZNF439Q8NDP4 499 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 ARHGAP5-AS1Q96IT6 56 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 FAM19A4Q96LR4 140 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 CNBD2Q96M20 576 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 B9D2Q9BPU9 175 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 NABP2Q9BQ15 211 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 GINS4Q9BRT9 223 aa2.25□□□□□ -2.05
GPNMB-212ENST00000487890 FAM103A1Q9BTL3 118 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms