RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 LYPD6BQ8NI32 183 aa9.73□□□□□ -0.85
COL4A6-207ENST00000487645 RNF183Q96D59 192 aa9.73□□□□□ -0.85
COL4A6-207ENST00000487645 VGLL1Q99990 258 aa9.73□□□□□ -0.85
COL4A6-207ENST00000487645 SLC35B3Q9H1N7 401 aa9.73□□□□□ -0.85
COL4A6-207ENST00000487645 MANBALQ9NQG1 85 aa9.73□□□□□ -0.85
COL4A6-207ENST00000487645 TGP01266 2768 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 IGKV2-40A0A087WW87 121 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-207ENST00000487645 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 F6UZH7 168 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 K7EQM0 130 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 SPRY2O43597 315 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 IGKV2D-40P01614 121 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-207ENST00000487645 TCRAP04437 139 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 NMBP08949 121 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 PRB4P10163 310 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-207ENST00000487645 ZNF138P52744 262 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 GOLT1AQ6ZVE7 132 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 CSNK1G2-AS1Q8NCQ2 148 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 HIST1H2BAQ96A08 127 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 RCHY1Q96PM5 261 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 TXNDC17Q9BRA2 123 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 ATG101Q9BSB4 218 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 ZNF492Q9P255 531 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 GNG13Q9P2W3 67 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 XCL2Q9UBD3 114 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 LENEPQ9Y5L5 61 aa9.72□□□□□ -0.85
COL4A6-207ENST00000487645 FBLL1A6NHQ2 334 aaKnown RBP9.71□□□□□ -0.86
COL4A6-207ENST00000487645 IFNA1P01562 189 aa9.71□□□□□ -0.86
COL4A6-207ENST00000487645 TAGLN2P37802 199 aaKnown RBP9.71□□□□□ -0.86
COL4A6-207ENST00000487645 LEPP41159 167 aa9.71□□□□□ -0.86
COL4A6-207ENST00000487645 CDKN1BP46527 198 aa9.71□□□□□ -0.86
COL4A6-207ENST00000487645 FXYD7P58549 80 aa9.71□□□□□ -0.86
COL4A6-207ENST00000487645 SPINK13Q1W4C9 94 aa9.71□□□□□ -0.86
COL4A6-207ENST00000487645 DEFB135Q30KP9 77 aa9.71□□□□□ -0.86
COL4A6-207ENST00000487645 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.86
COL4A6-207ENST00000487645 IGF2BP2-AS1Q96M15 143 aa9.71□□□□□ -0.86
COL4A6-207ENST00000487645 OVOL2Q9BRP0 275 aa9.71□□□□□ -0.86
COL4A6-207ENST00000487645 M0R2Z0 102 aa9.7□□□□□ -0.86
COL4A6-207ENST00000487645 CRISP2P16562 243 aa9.7□□□□□ -0.86
COL4A6-207ENST00000487645 GNG5P63218 68 aa9.7□□□□□ -0.86
COL4A6-207ENST00000487645 CYB561D1Q8N8Q1 229 aa9.7□□□□□ -0.86
COL4A6-207ENST00000487645 RPH3ALQ9UNE2 315 aa9.7□□□□□ -0.86
COL4A6-207ENST00000487645 C11orf94C9JXX5 98 aa9.69□□□□□ -0.86
COL4A6-207ENST00000487645 PEX7O00628 323 aa9.69□□□□□ -0.86
COL4A6-207ENST00000487645 CRXO43186 299 aaPredicted RBP9.69□□□□□ -0.86
COL4A6-207ENST00000487645 ATP5G3P48201 142 aa9.69□□□□□ -0.86
COL4A6-207ENST00000487645 C20orf144Q9BQM9 153 aa9.69□□□□□ -0.86
COL4A6-207ENST00000487645 DNAH9Q9NYC9 4486 aa9.69□□□□□ -0.86
COL4A6-207ENST00000487645 VAX2Q9UIW0 290 aa9.69□□□□□ -0.86
COL4A6-207ENST00000487645 TENM3Q9P273 2699 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 KLLNB2CW77 178 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 INSP01308 110 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 ZNF705AQ6ZN79 300 aaPredicted RBP9.68□□□□□ -0.86
COL4A6-207ENST00000487645 TMEM256Q8N2U0 113 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 TMEM75Q8N9X5 138 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 OR11H2Q8NH07 326 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 RARRES2Q99969 163 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 RETNQ9HD89 108 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 PSG8Q9UQ74 426 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 GOLT1BQ9Y3E0 138 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
COL4A6-207ENST00000487645 TRAV12-2A0A075B6T6 113 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 TRAV8-1A0A0A6YYK1 113 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 SMIM9A6NGZ8 99 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 IGLV2-11P01706 119 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 S100A9P06702 114 aaKnown RBP9.67□□□□□ -0.86
COL4A6-207ENST00000487645 GPX1P07203 203 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 BCL2P10415 239 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 FLI1Q01543 452 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-207ENST00000487645 MEF2BQ02080 365 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-207ENST00000487645 C1orf158Q8N1D5 194 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 ZFAND2AQ8N6M9 145 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 NEU1Q99519 415 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 U3KQK5 164 aa9.67□□□□□ -0.86
COL4A6-207ENST00000487645 TRBV6-1A0A0K0K1D8 114 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 RBFOX3A6NFN3 312 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 PDE6DO43924 150 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 SAPCD1Q5SSQ6 148 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 GFI1BQ5VTD9 330 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 ZNF767PQ75MW2 155 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 Q8TAT8 98 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 FMC1Q96HJ9 113 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 LINC00479Q96M42 142 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 NDFIP1Q9BT67 221 aa9.66□□□□□ -0.86
COL4A6-207ENST00000487645 LOC102723971A0A1B0GUV8 181 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 C7orf71A4D174 169 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 MIFP14174 115 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 RNASE4P34096 147 aaKnown RBP9.65□□□□□ -0.86
COL4A6-207ENST00000487645 KIR3DS1Q14943 382 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 TMEM183BQ1AE95 376 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 C2CD4CQ8TF44 421 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 C11orf52Q96A22 123 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 TVP23CQ96ET8 276 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 SGK494Q96LW2 274 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 TMEM208Q9BTX3 173 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 TREM1Q9NP99 234 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 ZFP30Q9Y2G7 519 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 X6R8D5 127 aa9.65□□□□□ -0.86
COL4A6-207ENST00000487645 TRAV12-3A0A0B4J271 114 aa9.64□□□□□ -0.87
COL4A6-207ENST00000487645 TRAV34A0A0B4J273 112 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms