RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 PLA2G10O15496 165 aa13.25□□□□□ -0.29
SMPDL3A-202ENST00000487215 C12orf45Q8N5I9 185 aaPredicted RBP13.25□□□□□ -0.29
SMPDL3A-202ENST00000487215 C2orf50Q96LR7 162 aa13.25□□□□□ -0.29
SMPDL3A-202ENST00000487215 UQCC1Q9NVA1 299 aa13.25□□□□□ -0.29
SMPDL3A-202ENST00000487215 ICOSQ9Y6W8 199 aa13.25□□□□□ -0.29
SMPDL3A-202ENST00000487215 TRAV6A0A075B6T7 132 aa13.24□□□□□ -0.29
SMPDL3A-202ENST00000487215 SLC25A5P05141 298 aaKnown RBP13.24□□□□□ -0.29
SMPDL3A-202ENST00000487215 S100A11P31949 105 aa13.24□□□□□ -0.29
SMPDL3A-202ENST00000487215 NRARPQ7Z6K4 114 aa13.24□□□□□ -0.29
SMPDL3A-202ENST00000487215 C7orf71A4D174 169 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 PAX4O43316 350 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 SPINK4O60575 86 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 ZNF324O75467 553 aaPredicted RBP13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 CST7O76096 145 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 IFNA5P01569 189 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 HBG1P69891 147 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 HBG2P69892 147 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 NFE4Q86UQ8 179 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 STX12Q86Y82 276 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 LINC00467Q9BRT7 94 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 NUDT15Q9NV35 164 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 WDR83OSQ9Y284 106 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 KLF12Q9Y4X4 402 aa13.23□□□□□ -0.29
SMPDL3A-202ENST00000487215 TRAV5A0A0B4J249 113 aa13.22□□□□□ -0.29
SMPDL3A-202ENST00000487215 ZNF253O75346 499 aa13.22□□□□□ -0.29
SMPDL3A-202ENST00000487215 RPL29P47914 159 aaKnown RBP13.22□□□□□ -0.29
SMPDL3A-202ENST00000487215 SULT1A1P50225 295 aa13.22□□□□□ -0.29
SMPDL3A-202ENST00000487215 BTN1A1Q13410 526 aa13.22□□□□□ -0.29
SMPDL3A-202ENST00000487215 ICAM4Q14773 271 aa13.22□□□□□ -0.29
SMPDL3A-202ENST00000487215 ANXA2RQ3ZCQ2 193 aa13.22□□□□□ -0.29
SMPDL3A-202ENST00000487215 EIF4E3Q8N5X7 224 aaKnown RBP13.22□□□□□ -0.29
SMPDL3A-202ENST00000487215 CCDC32Q9BV29 185 aa13.22□□□□□ -0.29
SMPDL3A-202ENST00000487215 FAM24AA6NFZ4 105 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 KLLNB2CW77 178 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 IGHV3-53P01767 116 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 SMR3BP02814 79 aaPredicted RBP13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 H2AFB2P0C5Z0 115 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 TCL1AP56279 114 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 CD300CQ08708 224 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 ERCC8Q13216 396 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 ATP6V1FQ16864 119 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 VWC2Q2TAL6 325 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 LYPD5Q6UWN5 251 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 CHAC2Q8WUX2 184 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 ST6GAL2Q96JF0 529 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 LYRM2Q9NU23 88 aaPredicted RBP13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 SLC39A9Q9NUM3 307 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 MDFICQ9P1T7 246 aa13.21□□□□□ -0.29
SMPDL3A-202ENST00000487215 M0R3E3 92 aa13.2□□□□□ -0.3
SMPDL3A-202ENST00000487215 S100A10P60903 97 aa13.2□□□□□ -0.3
SMPDL3A-202ENST00000487215 BAXQ07812 192 aa13.2□□□□□ -0.3
SMPDL3A-202ENST00000487215 MRPL53Q96EL3 112 aaKnown RBP13.2□□□□□ -0.3
SMPDL3A-202ENST00000487215 FAM19A4Q96LR4 140 aa13.2□□□□□ -0.3
SMPDL3A-202ENST00000487215 SEC22CQ9BRL7 303 aa13.2□□□□□ -0.3
SMPDL3A-202ENST00000487215 C11orf1Q9H5F2 150 aa13.2□□□□□ -0.3
SMPDL3A-202ENST00000487215 PRO0255Q9UI72 69 aa13.2□□□□□ -0.3
SMPDL3A-202ENST00000487215 FAM240BA0A1B0GVZ2 78 aa13.19□□□□□ -0.3
SMPDL3A-202ENST00000487215 MPDU1O75352 247 aa13.19□□□□□ -0.3
SMPDL3A-202ENST00000487215 MZT2BQ6NZ67 158 aa13.19□□□□□ -0.3
SMPDL3A-202ENST00000487215 MRPL16Q9NX20 251 aaKnown RBP13.19□□□□□ -0.3
SMPDL3A-202ENST00000487215 PRELID1Q9Y255 219 aa13.19□□□□□ -0.3
SMPDL3A-202ENST00000487215 UBE2L5PA0A1B0GUS4 154 aa13.18□□□□□ -0.3
SMPDL3A-202ENST00000487215 RNASE4P34096 147 aaKnown RBP13.18□□□□□ -0.3
SMPDL3A-202ENST00000487215 CRYBA4P53673 196 aa13.18□□□□□ -0.3
SMPDL3A-202ENST00000487215 IBA57Q5T440 356 aaKnown RBP13.18□□□□□ -0.3
SMPDL3A-202ENST00000487215 LINC00299Q6ZSB3 139 aa13.18□□□□□ -0.3
SMPDL3A-202ENST00000487215 TMEM252Q8N6L7 170 aa13.18□□□□□ -0.3
SMPDL3A-202ENST00000487215 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
SMPDL3A-202ENST00000487215 LY96Q9Y6Y9 160 aa13.18□□□□□ -0.3
SMPDL3A-202ENST00000487215 TRBV19A0A075B6N1 114 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 TRAV9-2A0A087WT02 112 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 GCSHP23434 173 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 PDE6HQ13956 83 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 MRPL23Q16540 153 aaKnown RBP13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 LINC00477Q96M19 166 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 C8orf49Q96NF6 230 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 VGLL1Q99990 258 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 AGPAT4-IT1Q9H0P7 198 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 TP53TG3Q9ULZ0 132 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 TIMM9Q9Y5J7 89 aa13.17□□□□□ -0.3
SMPDL3A-202ENST00000487215 PRAF2O60831 178 aa13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 HIST1H1EP10412 219 aaKnown RBP13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 FGF7P21781 194 aa13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 HAMPP81172 84 aa13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 SLAQ13239 276 aa13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 IL15RAQ13261 267 aa13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 RAB32Q13637 225 aa13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 FHL2Q14192 279 aa13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 NEGR1Q7Z3B1 354 aa13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 GPN1Q9HCN4 374 aaPredicted RBP13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 MSRB1Q9NZV6 116 aa13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 FLG2Q5D862 2391 aaPredicted RBP13.16□□□□□ -0.3
SMPDL3A-202ENST00000487215 IGSF23A1L1A6 192 aa13.15□□□□□ -0.3
SMPDL3A-202ENST00000487215 NDUFB4O95168 129 aa13.15□□□□□ -0.3
SMPDL3A-202ENST00000487215 CRISP2P16562 243 aa13.15□□□□□ -0.3
SMPDL3A-202ENST00000487215 PRR9Q5T870 116 aa13.15□□□□□ -0.3
SMPDL3A-202ENST00000487215 Q6ZQT7 251 aa13.15□□□□□ -0.3
SMPDL3A-202ENST00000487215 WFDC10BQ8IUB3 73 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms