RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 A0A1B0GVY2 172 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 PRSS29PA6NIE9 313 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 SNURFLB1AK76 121 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 MPC2O95563 127 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 NUDT3O95989 172 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 NMBP08949 121 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 ICAM4Q14773 271 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 PAXXQ9BUH6 204 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 FUT9Q9Y231 359 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 HSPB11Q9Y547 144 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 DNAH17Q9UFH2 4485 aa13.37□□□□□ -0.27
CLIP2-206ENST00000487091 FAT2Q9NYQ8 4349 aa13.36□□□□□ -0.27
CLIP2-206ENST00000487091 ZNF324O75467 553 aaPredicted RBP13.36□□□□□ -0.27
CLIP2-206ENST00000487091 CRISP2P16562 243 aa13.36□□□□□ -0.27
CLIP2-206ENST00000487091 DAZ2Q13117 558 aaKnown RBP13.36□□□□□ -0.27
CLIP2-206ENST00000487091 FXYD5Q96DB9 178 aa13.36□□□□□ -0.27
CLIP2-206ENST00000487091 LINC00467Q9BRT7 94 aa13.36□□□□□ -0.27
CLIP2-206ENST00000487091 BATF3Q9NR55 127 aa13.36□□□□□ -0.27
CLIP2-206ENST00000487091 SOHLH1Q5JUK2 328 aa13.35□□□□□ -0.27
CLIP2-206ENST00000487091 FAM122CQ6P4D5 195 aa13.35□□□□□ -0.27
CLIP2-206ENST00000487091 RNF141Q8WVD5 230 aa13.35□□□□□ -0.27
CLIP2-206ENST00000487091 GAGE12BA1L429 117 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 GAGE7O76087 117 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 GAGE12FP0CL80 117 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 GAGE12GP0CL81 117 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 GAGE12IP0CL82 117 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 RPL12P30050 165 aaKnown RBP13.34□□□□□ -0.27
CLIP2-206ENST00000487091 CCL18P55774 89 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 CD300CQ08708 224 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 ANXA2RQ3ZCQ2 193 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 TMEM78Q5T7P6 136 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 ZNF680Q8NEM1 530 aa13.34□□□□□ -0.27
CLIP2-206ENST00000487091 IGKV2-40A0A087WW87 121 aaPredicted RBP13.33□□□□□ -0.28
CLIP2-206ENST00000487091 IFNA5P01569 189 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 IGKV2D-40P01614 121 aaPredicted RBP13.33□□□□□ -0.28
CLIP2-206ENST00000487091 GPX1P07203 203 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 OR10J4P0C629 311 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 BTN1A1Q13410 526 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 OR5I1Q13606 314 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 C1orf134Q5TEV5 83 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 LYPD1Q8N2G4 141 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 ZNRF2Q8NHG8 242 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 SCGB1C1Q8TD33 95 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 ZNF503Q96F45 646 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 VGLL1Q99990 258 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 ZNF492Q9P255 531 aa13.33□□□□□ -0.28
CLIP2-206ENST00000487091 TRBV7-9A0A0J9YWB2 115 aa13.32□□□□□ -0.28
CLIP2-206ENST00000487091 OR7C2O60412 319 aa13.32□□□□□ -0.28
CLIP2-206ENST00000487091 M6PRP20645 277 aa13.32□□□□□ -0.28
CLIP2-206ENST00000487091 RNASE4P34096 147 aaKnown RBP13.32□□□□□ -0.28
CLIP2-206ENST00000487091 FFAR4Q5NUL3 377 aa13.32□□□□□ -0.28
CLIP2-206ENST00000487091 EIF4E3Q8N5X7 224 aaKnown RBP13.32□□□□□ -0.28
CLIP2-206ENST00000487091 ZFAND2AQ8N6M9 145 aa13.32□□□□□ -0.28
CLIP2-206ENST00000487091 C11orf72Q8NBR9 251 aa13.32□□□□□ -0.28
CLIP2-206ENST00000487091 RXFP4Q8TDU9 374 aa13.32□□□□□ -0.28
CLIP2-206ENST00000487091 GNPNAT1Q96EK6 184 aaPredicted RBP13.32□□□□□ -0.28
CLIP2-206ENST00000487091 PHYHIPLQ96FC7 376 aa13.32□□□□□ -0.28
CLIP2-206ENST00000487091 MBD2Q9UBB5 411 aa13.32□□□□□ -0.28
CLIP2-206ENST00000487091 TRAV26-1A0A087WT03 109 aa13.31□□□□□ -0.28
CLIP2-206ENST00000487091 H3BNG1 76 aa13.31□□□□□ -0.28
CLIP2-206ENST00000487091 TAS2R45P59539 299 aa13.31□□□□□ -0.28
CLIP2-206ENST00000487091 Q6ZTI0 123 aa13.31□□□□□ -0.28
CLIP2-206ENST00000487091 C18orf15Q96N68 181 aa13.31□□□□□ -0.28
CLIP2-206ENST00000487091 SMIM3Q9BZL3 60 aa13.31□□□□□ -0.28
CLIP2-206ENST00000487091 GSN-AS1Q9NRJ2 163 aa13.31□□□□□ -0.28
CLIP2-206ENST00000487091 LINC00588Q9Y4M8 146 aa13.31□□□□□ -0.28
CLIP2-206ENST00000487091 RBAKDNA6NC62 111 aa13.3□□□□□ -0.28
CLIP2-206ENST00000487091 HOXA5P20719 270 aa13.3□□□□□ -0.28
CLIP2-206ENST00000487091 CSN1S1P47710 185 aa13.3□□□□□ -0.28
CLIP2-206ENST00000487091 ZNF138P52744 262 aa13.3□□□□□ -0.28
CLIP2-206ENST00000487091 RANP62826 216 aaKnown RBP13.3□□□□□ -0.28
CLIP2-206ENST00000487091 NBDYA0A0U1RRE5 68 aa13.29□□□□□ -0.28
CLIP2-206ENST00000487091 TCL1AP56279 114 aa13.29□□□□□ -0.28
CLIP2-206ENST00000487091 UBE2L3P68036 154 aaKnown RBP13.29□□□□□ -0.28
CLIP2-206ENST00000487091 KHDC3LQ587J8 217 aa13.29□□□□□ -0.28
CLIP2-206ENST00000487091 IBA57Q5T440 356 aaKnown RBP13.29□□□□□ -0.28
CLIP2-206ENST00000487091 Q9H3A6 140 aa13.29□□□□□ -0.28
CLIP2-206ENST00000487091 HERC2O95714 4834 aa13.29□□□□□ -0.28
CLIP2-206ENST00000487091 A0A0J9YY99 117 aa13.28□□□□□ -0.28
CLIP2-206ENST00000487091 RGS13O14921 159 aa13.28□□□□□ -0.28
CLIP2-206ENST00000487091 PRR9Q5T870 116 aa13.28□□□□□ -0.28
CLIP2-206ENST00000487091 SSX7Q7RTT5 188 aa13.28□□□□□ -0.28
CLIP2-206ENST00000487091 TMPRSS5Q9H3S3 457 aa13.28□□□□□ -0.28
CLIP2-206ENST00000487091 WFDC1Q9HC57 220 aa13.28□□□□□ -0.28
CLIP2-206ENST00000487091 MUC4Q99102 2169 aa13.27□□□□□ -0.28
CLIP2-206ENST00000487091 TRGV2A0A075B6R0 118 aa13.27□□□□□ -0.29
CLIP2-206ENST00000487091 IGHV1OR15-1A0A075B7D0 117 aa13.27□□□□□ -0.29
CLIP2-206ENST00000487091 KLF12Q9Y4X4 402 aa13.27□□□□□ -0.29
CLIP2-206ENST00000487091 ALG5Q9Y673 324 aa13.27□□□□□ -0.29
CLIP2-206ENST00000487091 PKHD1P08F94 4074 aa13.26□□□□□ -0.29
CLIP2-206ENST00000487091 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
CLIP2-206ENST00000487091 SPINK4O60575 86 aa13.26□□□□□ -0.29
CLIP2-206ENST00000487091 ACOT6Q3I5F7 207 aaPredicted RBP13.26□□□□□ -0.29
CLIP2-206ENST00000487091 Q8TAT8 98 aa13.26□□□□□ -0.29
CLIP2-206ENST00000487091 LENEPQ9Y5L5 61 aa13.26□□□□□ -0.29
CLIP2-206ENST00000487091 KIAA1109Q2LD37 5005 aa13.25□□□□□ -0.29
CLIP2-206ENST00000487091 DIRC3C9JPN6 131 aa13.25□□□□□ -0.29
CLIP2-206ENST00000487091 ZNF266Q14584 549 aa13.25□□□□□ -0.29
CLIP2-206ENST00000487091 PQLC2Q6ZP29 291 aa13.25□□□□□ -0.29
CLIP2-206ENST00000487091 Q6ZQT7 251 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms