RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 Q6ZTI0 123 aa17.07■□□□□ 0.32
LIME1-206ENST00000487026 C6orf223Q8N319 242 aa17.07■□□□□ 0.32
LIME1-206ENST00000487026 SLC25A2Q9BXI2 301 aa17.07■□□□□ 0.32
LIME1-206ENST00000487026 OR5AC2Q9NZP5 309 aa17.07■□□□□ 0.32
LIME1-206ENST00000487026 C7orf71A4D174 169 aa17.06■□□□□ 0.32
LIME1-206ENST00000487026 RNASE4P34096 147 aaKnown RBP17.06■□□□□ 0.32
LIME1-206ENST00000487026 BTN1A1Q13410 526 aa17.06■□□□□ 0.32
LIME1-206ENST00000487026 LRRC37A5PQ49AS3 106 aa17.06■□□□□ 0.32
LIME1-206ENST00000487026 MIR17HGQ75NE6 70 aa17.06■□□□□ 0.32
LIME1-206ENST00000487026 RXFP4Q8TDU9 374 aa17.06■□□□□ 0.32
LIME1-206ENST00000487026 TMPRSS5Q9H3S3 457 aa17.06■□□□□ 0.32
LIME1-206ENST00000487026 GSN-AS1Q9NRJ2 163 aa17.06■□□□□ 0.32
LIME1-206ENST00000487026 PRELID1Q9Y255 219 aa17.06■□□□□ 0.32
LIME1-206ENST00000487026 RYR1P21817 5038 aa17.06■□□□□ 0.32
LIME1-206ENST00000487026 DAZ2Q13117 558 aaKnown RBP17.05■□□□□ 0.32
LIME1-206ENST00000487026 PDE6HQ13956 83 aa17.05■□□□□ 0.32
LIME1-206ENST00000487026 ICAM4Q14773 271 aa17.05■□□□□ 0.32
LIME1-206ENST00000487026 ENKURQ8TC29 256 aa17.05■□□□□ 0.32
LIME1-206ENST00000487026 FAM167A-AS1Q96KT0 104 aa17.05■□□□□ 0.32
LIME1-206ENST00000487026 FAM19A4Q96LR4 140 aa17.05■□□□□ 0.32
LIME1-206ENST00000487026 LINC00477Q96M19 166 aa17.05■□□□□ 0.32
LIME1-206ENST00000487026 Q9H8V8 135 aa17.05■□□□□ 0.32
LIME1-206ENST00000487026 KLLNB2CW77 178 aa17.04■□□□□ 0.32
LIME1-206ENST00000487026 H0YIZ8 118 aa17.04■□□□□ 0.32
LIME1-206ENST00000487026 ZNF324O75467 553 aaPredicted RBP17.04■□□□□ 0.32
LIME1-206ENST00000487026 FAM122CQ6P4D5 195 aa17.04■□□□□ 0.32
LIME1-206ENST00000487026 SLC25A31Q9H0C2 315 aa17.04■□□□□ 0.32
LIME1-206ENST00000487026 IGKV2-40A0A087WW87 121 aaPredicted RBP17.03■□□□□ 0.32
LIME1-206ENST00000487026 E5RGE8 158 aa17.03■□□□□ 0.32
LIME1-206ENST00000487026 IGKV2D-40P01614 121 aaPredicted RBP17.03■□□□□ 0.32
LIME1-206ENST00000487026 ESRGQ1W209 222 aa17.03■□□□□ 0.32
LIME1-206ENST00000487026 C11orf72Q8NBR9 251 aa17.03■□□□□ 0.32
LIME1-206ENST00000487026 VGLL1Q99990 258 aa17.03■□□□□ 0.32
LIME1-206ENST00000487026 AAMDCQ9H7C9 122 aa17.03■□□□□ 0.32
LIME1-206ENST00000487026 MUC4Q99102 2169 aa17.03■□□□□ 0.32
LIME1-206ENST00000487026 GPX1P07203 203 aa17.02■□□□□ 0.32
LIME1-206ENST00000487026 IFITM3Q01628 133 aa17.02■□□□□ 0.32
LIME1-206ENST00000487026 Q6ZQT7 251 aa17.02■□□□□ 0.32
LIME1-206ENST00000487026 ZNF503Q96F45 646 aa17.02■□□□□ 0.32
LIME1-206ENST00000487026 NMES1Q9C002 83 aa17.02■□□□□ 0.32
LIME1-206ENST00000487026 OR51M1Q9H341 326 aa17.02■□□□□ 0.32
LIME1-206ENST00000487026 TRGV2A0A075B6R0 118 aa17.01■□□□□ 0.31
LIME1-206ENST00000487026 UPK1BO75841 260 aa17.01■□□□□ 0.31
LIME1-206ENST00000487026 OR10J4P0C629 311 aa17.01■□□□□ 0.31
LIME1-206ENST00000487026 NBEAP1P0C6P0 100 aa17.01■□□□□ 0.31
LIME1-206ENST00000487026 C9orf47Q6ZRZ4 202 aa17.01■□□□□ 0.31
LIME1-206ENST00000487026 EIF4E3Q8N5X7 224 aaKnown RBP17.01■□□□□ 0.31
LIME1-206ENST00000487026 KLF12Q9Y4X4 402 aa17.01■□□□□ 0.31
LIME1-206ENST00000487026 TRGV1A0A0A0MS02 117 aa17■□□□□ 0.31
LIME1-206ENST00000487026 TMEM78Q5T7P6 136 aa17■□□□□ 0.31
LIME1-206ENST00000487026 PRR9Q5T870 116 aa17■□□□□ 0.31
LIME1-206ENST00000487026 ZNF680Q8NEM1 530 aa17■□□□□ 0.31
LIME1-206ENST00000487026 KRTAP1-5Q9BYS1 174 aa17■□□□□ 0.31
LIME1-206ENST00000487026 WDR61Q9GZS3 305 aaKnown RBP17■□□□□ 0.31
LIME1-206ENST00000487026 TP53TG3Q9ULZ0 132 aa17■□□□□ 0.31
LIME1-206ENST00000487026 CRISP2P16562 243 aa16.99■□□□□ 0.31
LIME1-206ENST00000487026 FXYD5Q96DB9 178 aa16.99■□□□□ 0.31
LIME1-206ENST00000487026 LINC00467Q9BRT7 94 aa16.99■□□□□ 0.31
LIME1-206ENST00000487026 PAXXQ9BUH6 204 aa16.99■□□□□ 0.31
LIME1-206ENST00000487026 INMT-MINDY4F8WBC2 141 aa16.98■□□□□ 0.31
LIME1-206ENST00000487026 DEFA1P59665 94 aa16.98■□□□□ 0.31
LIME1-206ENST00000487026 DEFA3P59666 94 aa16.98■□□□□ 0.31
LIME1-206ENST00000487026 ANXA2RQ3ZCQ2 193 aa16.98■□□□□ 0.31
LIME1-206ENST00000487026 ZFAND2AQ8N6M9 145 aa16.98■□□□□ 0.31
LIME1-206ENST00000487026 VSIG2Q96IQ7 327 aa16.98■□□□□ 0.31
LIME1-206ENST00000487026 FUT9Q9Y231 359 aa16.98■□□□□ 0.31
LIME1-206ENST00000487026 C16orf90A8MZG2 172 aa16.97■□□□□ 0.31
LIME1-206ENST00000487026 H3BNG1 76 aa16.97■□□□□ 0.31
LIME1-206ENST00000487026 H2BFSP57053 126 aa16.97■□□□□ 0.31
LIME1-206ENST00000487026 CYCSP99999 105 aaKnown RBP16.97■□□□□ 0.31
LIME1-206ENST00000487026 PHYHIPLQ96FC7 376 aa16.97■□□□□ 0.31
LIME1-206ENST00000487026 ZNF492Q9P255 531 aa16.97■□□□□ 0.31
LIME1-206ENST00000487026 LRP1BQ9NZR2 4599 aa16.96■□□□□ 0.31
LIME1-206ENST00000487026 RGS13O14921 159 aa16.96■□□□□ 0.31
LIME1-206ENST00000487026 PRAF2O60831 178 aa16.96■□□□□ 0.31
LIME1-206ENST00000487026 MRPL32Q9BYC8 188 aaKnown RBP16.96■□□□□ 0.31
LIME1-206ENST00000487026 ABCA13Q86UQ4 5058 aa16.96■□□□□ 0.31
LIME1-206ENST00000487026 A0A096LPF7 62 aa16.95■□□□□ 0.3
LIME1-206ENST00000487026 SPINK4O60575 86 aa16.95■□□□□ 0.3
LIME1-206ENST00000487026 NMBP08949 121 aa16.95■□□□□ 0.3
LIME1-206ENST00000487026 Q8TAT8 98 aa16.95■□□□□ 0.3
LIME1-206ENST00000487026 PPP1R1CQ8WVI7 109 aa16.95■□□□□ 0.3
LIME1-206ENST00000487026 UPK3BQ9BT76 320 aa16.95■□□□□ 0.3
LIME1-206ENST00000487026 MRPS16Q9Y3D3 137 aaKnown RBP16.95■□□□□ 0.3
LIME1-206ENST00000487026 HSPG2P98160 4391 aa16.94■□□□□ 0.3
LIME1-206ENST00000487026 IGHV1OR15-1A0A075B7D0 117 aa16.94■□□□□ 0.3
LIME1-206ENST00000487026 C17orf112F2Z3M2 114 aa16.94■□□□□ 0.3
LIME1-206ENST00000487026 OR7C2O60412 319 aa16.94■□□□□ 0.3
LIME1-206ENST00000487026 ZNF138P52744 262 aa16.94■□□□□ 0.3
LIME1-206ENST00000487026 TCL1AP56279 114 aa16.94■□□□□ 0.3
LIME1-206ENST00000487026 RANP62826 216 aaKnown RBP16.94■□□□□ 0.3
LIME1-206ENST00000487026 C18orf15Q96N68 181 aa16.94■□□□□ 0.3
LIME1-206ENST00000487026 Q9H3A6 140 aa16.94■□□□□ 0.3
LIME1-206ENST00000487026 KCNIP2Q9NS61 270 aa16.94■□□□□ 0.3
LIME1-206ENST00000487026 IGHV3-53P01767 116 aa16.93■□□□□ 0.3
LIME1-206ENST00000487026 ATP5SQ99766 215 aa16.93■□□□□ 0.3
LIME1-206ENST00000487026 KRTAP4-5Q9BYR2 181 aa16.93■□□□□ 0.3
LIME1-206ENST00000487026 MRPL16Q9NX20 251 aaKnown RBP16.93■□□□□ 0.3
LIME1-206ENST00000487026 EIF3GO75821 320 aaKnown RBP eCLIP16.92■□□□□ 0.3
LIME1-206ENST00000487026 TTC32Q5I0X7 151 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms