RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 GRIFINA4D1Z8 144 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 TMEM189A5PLL7 270 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 LGALS9O00182 355 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 SERF1AO75920 110 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 SRIP30626 198 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 ZNF138P52744 262 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 HIST1H1AQ02539 215 aaPredicted RBP9.12□□□□□ -0.95
PKP4-213ENST00000486254 LINC01559Q495D7 138 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 ZNF493Q6ZR52 646 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 BAGE3Q86Y29 109 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 UBE2E2Q96LR5 201 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 NRN1Q9NPD7 142 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 OVOL1O14753 267 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 IGHV3-11P01762 117 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 LGALS1P09382 135 aaKnown RBP9.12□□□□□ -0.95
PKP4-213ENST00000486254 TMEM78Q5T7P6 136 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 C18orf32Q8TCD1 76 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 BORCS7Q96B45 105 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 KCNS1Q96KK3 526 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 ALKBH7Q9BT30 221 aaPredicted RBP9.12□□□□□ -0.95
PKP4-213ENST00000486254 SMPXQ9UHP9 88 aa9.12□□□□□ -0.95
PKP4-213ENST00000486254 ZNF705FA8MVS1 300 aaPredicted RBP9.11□□□□□ -0.95
PKP4-213ENST00000486254 SMAD7O15105 426 aaKnown RBP9.11□□□□□ -0.95
PKP4-213ENST00000486254 HOXA3O43365 443 aaPredicted RBP9.11□□□□□ -0.95
PKP4-213ENST00000486254 ZNF207O43670 478 aaKnown RBP9.11□□□□□ -0.95
PKP4-213ENST00000486254 IGLC6P0CF74 106 aa9.11□□□□□ -0.95
PKP4-213ENST00000486254 HLA-DMBP28068 263 aa9.11□□□□□ -0.95
PKP4-213ENST00000486254 TMEM95Q3KNT9 176 aa9.11□□□□□ -0.95
PKP4-213ENST00000486254 Q71RC1 249 aaPredicted RBP9.11□□□□□ -0.95
PKP4-213ENST00000486254 WFDC12Q8WWY7 111 aa9.11□□□□□ -0.95
PKP4-213ENST00000486254 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
PKP4-213ENST00000486254 LINC00477Q96M19 166 aa9.11□□□□□ -0.95
PKP4-213ENST00000486254 IGHV3-66A0A0C4DH42 116 aa9.1□□□□□ -0.95
PKP4-213ENST00000486254 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
PKP4-213ENST00000486254 GZMBP10144 247 aa9.1□□□□□ -0.95
PKP4-213ENST00000486254 CAMPP49913 170 aa9.1□□□□□ -0.95
PKP4-213ENST00000486254 IQCJQ1A5X6 159 aa9.1□□□□□ -0.95
PKP4-213ENST00000486254 Q8TAT8 98 aa9.1□□□□□ -0.95
PKP4-213ENST00000486254 RHPN1-AS1Q9BWJ2 59 aa9.1□□□□□ -0.95
PKP4-213ENST00000486254 AGPAT4-IT1Q9H0P7 198 aa9.1□□□□□ -0.95
PKP4-213ENST00000486254 IGHV3OR16-13A0A075B7E8 117 aa9.09□□□□□ -0.95
PKP4-213ENST00000486254 LOC102724200A0A096LPH7 203 aaPredicted RBP9.09□□□□□ -0.95
PKP4-213ENST00000486254 IGHV3-74A0A0B4J1X5 117 aa9.09□□□□□ -0.95
PKP4-213ENST00000486254 IL17RELQ6ZVW7 336 aa9.09□□□□□ -0.95
PKP4-213ENST00000486254 RNF182Q8N6D2 247 aa9.09□□□□□ -0.95
PKP4-213ENST00000486254 WFDC11Q8NEX6 87 aa9.09□□□□□ -0.95
PKP4-213ENST00000486254 GSN-AS1Q9NRJ2 163 aa9.09□□□□□ -0.95
PKP4-213ENST00000486254 ZANQ9Y493 2812 aa9.09□□□□□ -0.95
PKP4-213ENST00000486254 ITPR3Q14573 2671 aa9.09□□□□□ -0.95
PKP4-213ENST00000486254 IGHV3-49A0A0A0MS15 119 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 A0A1B0GUS0 222 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 F2Z2F3 143 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 NUPR1O60356 82 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 ZNF324O75467 553 aaPredicted RBP9.08□□□□□ -0.96
PKP4-213ENST00000486254 GPX1P07203 203 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 ARMS2P0C7Q2 107 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 ZNF80P51504 273 aaPredicted RBP9.08□□□□□ -0.96
PKP4-213ENST00000486254 SCGB2A2Q13296 93 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 KIAA1644Q3SXP7 199 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 IGFL4Q6B9Z1 124 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 VPS13CQ709C8 3753 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 APRG1Q8IVJ8 170 aa9.08□□□□□ -0.96
PKP4-213ENST00000486254 HELZ2Q9BYK8 2649 aaKnown RBP9.07□□□□□ -0.96
PKP4-213ENST00000486254 TMEM213A2RRL7 107 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 CD5LO43866 347 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 FER1L6-AS1Q8NA97 138 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 CHCHD1Q96BP2 118 aaKnown RBP9.07□□□□□ -0.96
PKP4-213ENST00000486254 FAM19A4Q96LR4 140 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 SAMD10Q9BYL1 202 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 MAP1AP78559 2803 aaPredicted RBP9.07□□□□□ -0.96
PKP4-213ENST00000486254 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
PKP4-213ENST00000486254 RAB4AP20338 218 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 ID1P41134 155 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 ERCC8Q13216 396 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 LCNL1Q6ZST4 164 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 SIGLECL1Q8N7X8 197 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 ZNF738Q8NE65 137 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 OR10J6PQ8NGY7 276 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 SSBP4Q9BWG4 385 aaPredicted RBP9.07□□□□□ -0.96
PKP4-213ENST00000486254 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 TMEM160Q9NX00 188 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 CELSR1Q9NYQ6 3014 aa9.07□□□□□ -0.96
PKP4-213ENST00000486254 PMCHP20382 165 aa9.06□□□□□ -0.96
PKP4-213ENST00000486254 TM4SF20Q53R12 229 aa9.06□□□□□ -0.96
PKP4-213ENST00000486254 LYZL1Q6UWQ5 148 aa9.06□□□□□ -0.96
PKP4-213ENST00000486254 ZNF575Q86XF7 245 aa9.06□□□□□ -0.96
PKP4-213ENST00000486254 C20orf173Q96LM9 149 aa9.06□□□□□ -0.96
PKP4-213ENST00000486254 RCHY1Q96PM5 261 aa9.06□□□□□ -0.96
PKP4-213ENST00000486254 U3KQK5 164 aa9.06□□□□□ -0.96
PKP4-213ENST00000486254 AMTP48728 403 aa9.05□□□□□ -0.96
PKP4-213ENST00000486254 KRTAP1-1Q07627 177 aa9.05□□□□□ -0.96
PKP4-213ENST00000486254 Q6ZWC4 215 aa9.05□□□□□ -0.96
PKP4-213ENST00000486254 OR8A1Q8NGG7 326 aa9.05□□□□□ -0.96
PKP4-213ENST00000486254 DCANP1Q8TF63 244 aa9.05□□□□□ -0.96
PKP4-213ENST00000486254 SVEP1Q4LDE5 3571 aa9.05□□□□□ -0.96
PKP4-213ENST00000486254 TENM4Q6N022 2769 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms