RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 BSPH1Q075Z2 132 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 FOXF1Q12946 379 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 CIRBPQ14011 172 aaKnown RBP3.29□□□□□ -1.88
RTN4-213ENST00000485749 ADAMTSL4-AS1Q5T5F5 129 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 GFI1BQ5VTD9 330 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 REG3GQ6UW15 175 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 TOMM5Q8N4H5 51 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 DAND5Q8N907 189 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 TSKUQ8WUA8 353 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 LSM10Q969L4 123 aaKnown RBP3.29□□□□□ -1.88
RTN4-213ENST00000485749 VGLL1Q99990 258 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 CHAC1Q9BUX1 264 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 TNFRSF19Q9NS68 423 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 TMEM242Q9NWH2 141 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 ZNF835Q9Y2P0 537 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 Q9Y3F1 56 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 SMCHD1A6NHR9 2005 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 PHF3Q92576 2039 aaKnown RBP3.29□□□□□ -1.88
RTN4-213ENST00000485749 SCN10AQ9Y5Y9 1956 aa3.29□□□□□ -1.88
RTN4-213ENST00000485749 DICER1Q9UPY3 1922 aaKnown RBP3.29□□□□□ -1.88
RTN4-213ENST00000485749 ZNF236Q9UL36 1845 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 COL4A5P29400 1685 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 RALGAPA1Q6GYQ0 2036 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 IGHV3-74A0A0B4J1X5 117 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 PIGBOS1A0A0B4J2F0 54 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 CXorf51AA0A1B0GTR3 108 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 UBE2L5PA0A1B0GUS4 154 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 KANTRA0A1W2PQU2 76 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 RPL37AP8A6NKH3 93 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 IGLV2-8P01709 118 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 SFTA3P0C7M3 94 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 ZNF823P16415 610 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 ZNF32P17041 273 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 CBLN1P23435 193 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 FUSP35637 526 aaKnown RBP eCLIP3.28□□□□□ -1.88
RTN4-213ENST00000485749 NANOS2P60321 138 aaKnown RBP3.28□□□□□ -1.88
RTN4-213ENST00000485749 FGF12P61328 243 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 GNB1P62873 340 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 UBE2L3P68036 154 aaKnown RBP3.28□□□□□ -1.88
RTN4-213ENST00000485749 RSPO1Q2MKA7 263 aaPredicted RBP3.28□□□□□ -1.88
RTN4-213ENST00000485749 MPV17L2Q567V2 206 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 MIC13Q5XKP0 118 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 PCP2Q8IVA1 136 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 AMN1Q8IY45 258 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 SLC25A29Q8N8R3 303 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 OR2T35Q8NGX2 323 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 WFDC5Q8TCV5 224 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 C10orf105Q8TEF2 133 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 SMIM14Q96QK8 99 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 DSCR8Q96T75 97 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 C20orf78Q9BR46 151 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 Q9H3A6 140 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 ABRACLQ9P1F3 81 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 CSAG2Q9Y5P2 127 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 SBF1O95248 1867 aa3.28□□□□□ -1.88
RTN4-213ENST00000485749 NUP210Q8TEM1 1887 aaPredicted RBP3.28□□□□□ -1.88
RTN4-213ENST00000485749 CROCCQ5TZA2 2017 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 RLFQ13129 1914 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 IGLV3-16A0A075B6K0 115 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 IGHV3OR16-10A0A075B7F0 116 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 IGKV1-9A0A0C4DH69 117 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 SNRPGP15A8MWD9 76 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 INS-IGF2F8WCM5 200 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 C19orf84I3L1E1 186 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 SDCBPO00560 298 aaPredicted RBP3.27□□□□□ -1.89
RTN4-213ENST00000485749 CREBL2O60519 120 aaPredicted RBP3.27□□□□□ -1.89
RTN4-213ENST00000485749 ZNF324O75467 553 aaPredicted RBP3.27□□□□□ -1.89
RTN4-213ENST00000485749 PATE4P0C8F1 98 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 PLA2G2AP14555 144 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 KRTDAPP60985 99 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 ZNF322Q6U7Q0 402 aaPredicted RBP3.27□□□□□ -1.89
RTN4-213ENST00000485749 HMGN2P46Q86SG4 172 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 OR5AS1Q8N127 324 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 SIGLECL1Q8N7X8 197 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 SPTSSAQ969W0 71 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 TAS2R4Q9NYW5 299 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 LINC00588Q9Y4M8 146 aa3.27□□□□□ -1.89
RTN4-213ENST00000485749 TDRD15B5MCY1 1934 aaKnown RBP3.27□□□□□ -1.89
RTN4-213ENST00000485749 IGLV4-3A0A075B6K6 122 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 TRAV1-2A0A0B4J238 106 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 TRBV7-7A0A0K0K1E9 115 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 TIMM17BO60830 172 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 IGKCP01834 107 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 IL5P05113 134 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 MT3P25713 68 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 RPL27AP46776 148 aaKnown RBP3.26□□□□□ -1.89
RTN4-213ENST00000485749 BLCAPP62952 87 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 RPL18Q07020 188 aaKnown RBP3.26□□□□□ -1.89
RTN4-213ENST00000485749 PRR4Q16378 134 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 ZNF660Q6AZW8 331 aaPredicted RBP3.26□□□□□ -1.89
RTN4-213ENST00000485749 C2orf66Q6UXQ4 117 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 ZNF497Q6ZNH5 498 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 MIR17HGQ75NE6 70 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 COMMD6Q7Z4G1 85 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 SBSPONQ8IVN8 264 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 ORMDL3Q8N138 153 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 FAM216BQ8N7L0 139 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 C3orf56Q8N813 242 aa3.26□□□□□ -1.89
RTN4-213ENST00000485749 SMIM4Q8WVI0 70 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 1075.9 ms