RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TRAV26-1A0A087WT03 109 aa11.95□□□□□ -0.5
SMC4-216ENST00000485645 M6PRP20645 277 aa11.95□□□□□ -0.5
SMC4-216ENST00000485645 TNP2Q05952 138 aa11.95□□□□□ -0.5
SMC4-216ENST00000485645 CHAC2Q8WUX2 184 aa11.95□□□□□ -0.5
SMC4-216ENST00000485645 MRPL53Q96EL3 112 aaKnown RBP11.95□□□□□ -0.5
SMC4-216ENST00000485645 PYGO2Q9BRQ0 406 aa11.95□□□□□ -0.5
SMC4-216ENST00000485645 ALG5Q9Y673 324 aa11.95□□□□□ -0.5
SMC4-216ENST00000485645 TRBV19A0A075B6N1 114 aa11.94□□□□□ -0.5
SMC4-216ENST00000485645 FGF7P21781 194 aa11.94□□□□□ -0.5
SMC4-216ENST00000485645 NHLH2Q02577 135 aa11.94□□□□□ -0.5
SMC4-216ENST00000485645 RXFP4Q8TDU9 374 aa11.94□□□□□ -0.5
SMC4-216ENST00000485645 ZNF503Q96F45 646 aa11.94□□□□□ -0.5
SMC4-216ENST00000485645 A0A0J9YY99 117 aa11.93□□□□□ -0.5
SMC4-216ENST00000485645 MPC2O95563 127 aa11.93□□□□□ -0.5
SMC4-216ENST00000485645 SLC25A5P05141 298 aaKnown RBP11.93□□□□□ -0.5
SMC4-216ENST00000485645 PET100P0DJ07 73 aa11.93□□□□□ -0.5
SMC4-216ENST00000485645 HOXA5P20719 270 aa11.93□□□□□ -0.5
SMC4-216ENST00000485645 Q9H8V8 135 aa11.93□□□□□ -0.5
SMC4-216ENST00000485645 TMEM14CQ9P0S9 112 aa11.93□□□□□ -0.5
SMC4-216ENST00000485645 PRELID1Q9Y255 219 aa11.93□□□□□ -0.5
SMC4-216ENST00000485645 M0R3E3 92 aa11.92□□□□□ -0.5
SMC4-216ENST00000485645 HIST1H1EP10412 219 aaKnown RBP11.92□□□□□ -0.5
SMC4-216ENST00000485645 DAZ2Q13117 558 aaKnown RBP11.92□□□□□ -0.5
SMC4-216ENST00000485645 PDE6HQ13956 83 aa11.92□□□□□ -0.5
SMC4-216ENST00000485645 OR5C1Q8NGR4 320 aa11.92□□□□□ -0.5
SMC4-216ENST00000485645 LINC00477Q96M19 166 aa11.92□□□□□ -0.5
SMC4-216ENST00000485645 TIMM9Q9Y5J7 89 aa11.92□□□□□ -0.5
SMC4-216ENST00000485645 C16orf90A8MZG2 172 aa11.91□□□□□ -0.5
SMC4-216ENST00000485645 H3BNG1 76 aa11.91□□□□□ -0.5
SMC4-216ENST00000485645 MPDU1O75352 247 aa11.91□□□□□ -0.5
SMC4-216ENST00000485645 ERCC8Q13216 396 aa11.91□□□□□ -0.5
SMC4-216ENST00000485645 HSPG2P98160 4391 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 C7orf71A4D174 169 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 NDUFB4O95168 129 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 PYYP10082 97 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 TTC32Q5I0X7 151 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 Q6ZTI0 123 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 ZNF680Q8NEM1 530 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 BLNKQ8WV28 456 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 NPCDR1Q9BY65 106 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 TMPRSS5Q9H3S3 457 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 AAMDCQ9H7C9 122 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 LRP1BQ9NZR2 4599 aa11.9□□□□□ -0.5
SMC4-216ENST00000485645 KLLNB2CW77 178 aa11.89□□□□□ -0.51
SMC4-216ENST00000485645 ESRGQ1W209 222 aa11.89□□□□□ -0.51
SMC4-216ENST00000485645 GCSAMLQ5JQS6 135 aa11.89□□□□□ -0.51
SMC4-216ENST00000485645 EXOC3-AS1Q8N2X6 119 aa11.89□□□□□ -0.51
SMC4-216ENST00000485645 FAM19A4Q96LR4 140 aa11.89□□□□□ -0.51
SMC4-216ENST00000485645 AGPAT4-IT1Q9H0P7 198 aa11.89□□□□□ -0.51
SMC4-216ENST00000485645 MED28Q9H204 178 aa11.89□□□□□ -0.51
SMC4-216ENST00000485645 GSN-AS1Q9NRJ2 163 aa11.89□□□□□ -0.51
SMC4-216ENST00000485645 TRGV2A0A075B6R0 118 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 ZNF324O75467 553 aaPredicted RBP11.88□□□□□ -0.51
SMC4-216ENST00000485645 CD300CQ08708 224 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 BTN1A1Q13410 526 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 RGS21Q2M5E4 152 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 EIF4E3Q8N5X7 224 aaKnown RBP11.88□□□□□ -0.51
SMC4-216ENST00000485645 C11orf72Q8NBR9 251 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 THAP6Q8TBB0 222 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 LINC00467Q9BRT7 94 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 UPK3BQ9BT76 320 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 Q9H3A6 140 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 MBD2Q9UBB5 411 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 HSPB11Q9Y547 144 aa11.88□□□□□ -0.51
SMC4-216ENST00000485645 ABCA13Q86UQ4 5058 aa11.87□□□□□ -0.51
SMC4-216ENST00000485645 GPX1P07203 203 aa11.87□□□□□ -0.51
SMC4-216ENST00000485645 RPL12P30050 165 aaKnown RBP11.87□□□□□ -0.51
SMC4-216ENST00000485645 RNASE4P34096 147 aaKnown RBP11.87□□□□□ -0.51
SMC4-216ENST00000485645 ANXA2RQ3ZCQ2 193 aa11.87□□□□□ -0.51
SMC4-216ENST00000485645 C9orf47Q6ZRZ4 202 aa11.87□□□□□ -0.51
SMC4-216ENST00000485645 C18orf15Q96N68 181 aa11.87□□□□□ -0.51
SMC4-216ENST00000485645 SLC25A2Q9BXI2 301 aa11.87□□□□□ -0.51
SMC4-216ENST00000485645 MRPS16Q9Y3D3 137 aaKnown RBP11.87□□□□□ -0.51
SMC4-216ENST00000485645 TRGV1A0A0A0MS02 117 aa11.86□□□□□ -0.51
SMC4-216ENST00000485645 CRISP2P16562 243 aa11.86□□□□□ -0.51
SMC4-216ENST00000485645 ICAM4Q14773 271 aa11.86□□□□□ -0.51
SMC4-216ENST00000485645 TMEM78Q5T7P6 136 aa11.86□□□□□ -0.51
SMC4-216ENST00000485645 ATP5SQ99766 215 aa11.86□□□□□ -0.51
SMC4-216ENST00000485645 KRTAP1-5Q9BYS1 174 aa11.86□□□□□ -0.51
SMC4-216ENST00000485645 WDR61Q9GZS3 305 aaKnown RBP11.86□□□□□ -0.51
SMC4-216ENST00000485645 FUT9Q9Y231 359 aa11.86□□□□□ -0.51
SMC4-216ENST00000485645 IGKV2-40A0A087WW87 121 aaPredicted RBP11.85□□□□□ -0.51
SMC4-216ENST00000485645 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
SMC4-216ENST00000485645 IGKV2D-40P01614 121 aaPredicted RBP11.85□□□□□ -0.51
SMC4-216ENST00000485645 NMBP08949 121 aa11.85□□□□□ -0.51
SMC4-216ENST00000485645 NBEAP1P0C6P0 100 aa11.85□□□□□ -0.51
SMC4-216ENST00000485645 FAM122CQ6P4D5 195 aa11.85□□□□□ -0.51
SMC4-216ENST00000485645 MIR17HGQ75NE6 70 aa11.85□□□□□ -0.51
SMC4-216ENST00000485645 VSIG2Q96IQ7 327 aa11.85□□□□□ -0.51
SMC4-216ENST00000485645 FAM167A-AS1Q96KT0 104 aa11.85□□□□□ -0.51
SMC4-216ENST00000485645 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
SMC4-216ENST00000485645 KCNIP2Q9NS61 270 aa11.85□□□□□ -0.51
SMC4-216ENST00000485645 A0A096LPF7 62 aa11.84□□□□□ -0.51
SMC4-216ENST00000485645 RGS13O14921 159 aa11.84□□□□□ -0.51
SMC4-216ENST00000485645 SPINK4O60575 86 aa11.84□□□□□ -0.51
SMC4-216ENST00000485645 CDK2AP2O75956 126 aa11.84□□□□□ -0.51
SMC4-216ENST00000485645 TCL1AP56279 114 aa11.84□□□□□ -0.51
SMC4-216ENST00000485645 IBA57Q5T440 356 aaKnown RBP11.84□□□□□ -0.51
SMC4-216ENST00000485645 VGLL1Q99990 258 aa11.84□□□□□ -0.51
SMC4-216ENST00000485645 KLF12Q9Y4X4 402 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms