RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TMEM78Q5T7P6 136 aa14.52□□□□□ -0.09
COL6A2-208ENST00000485591 VGLL1Q99990 258 aa14.52□□□□□ -0.09
COL6A2-208ENST00000485591 DNAH9Q9NYC9 4486 aa14.51□□□□□ -0.09
COL6A2-208ENST00000485591 M0R2Z0 102 aa14.51□□□□□ -0.09
COL6A2-208ENST00000485591 TCRAP04437 139 aa14.51□□□□□ -0.09
COL6A2-208ENST00000485591 CDKN1BP46527 198 aa14.51□□□□□ -0.09
COL6A2-208ENST00000485591 BLOC1S1P78537 153 aa14.51□□□□□ -0.09
COL6A2-208ENST00000485591 GOLT1AQ6ZVE7 132 aa14.51□□□□□ -0.09
COL6A2-208ENST00000485591 EPDR1Q9UM22 224 aa14.51□□□□□ -0.09
COL6A2-208ENST00000485591 CRXO43186 299 aaPredicted RBP14.5□□□□□ -0.09
COL6A2-208ENST00000485591 PAGE4O60829 102 aa14.5□□□□□ -0.09
COL6A2-208ENST00000485591 TSPOP30536 169 aa14.5□□□□□ -0.09
COL6A2-208ENST00000485591 CCL20P78556 96 aa14.5□□□□□ -0.09
COL6A2-208ENST00000485591 TEX261Q6UWH6 196 aa14.5□□□□□ -0.09
COL6A2-208ENST00000485591 FAM19A4Q96LR4 140 aa14.5□□□□□ -0.09
COL6A2-208ENST00000485591 IGF2BP2-AS1Q96M15 143 aa14.5□□□□□ -0.09
COL6A2-208ENST00000485591 MANBALQ9NQG1 85 aa14.5□□□□□ -0.09
COL6A2-208ENST00000485591 ZNF492Q9P255 531 aa14.5□□□□□ -0.09
COL6A2-208ENST00000485591 U3KQK5 164 aa14.5□□□□□ -0.09
COL6A2-208ENST00000485591 IFNA7P01567 189 aa14.49□□□□□ -0.09
COL6A2-208ENST00000485591 LEPP41159 167 aa14.49□□□□□ -0.09
COL6A2-208ENST00000485591 ZNF138P52744 262 aa14.49□□□□□ -0.09
COL6A2-208ENST00000485591 CST9LP1Q5W188 147 aa14.49□□□□□ -0.09
COL6A2-208ENST00000485591 CCDC28AQ8IWP9 274 aa14.49□□□□□ -0.09
COL6A2-208ENST00000485591 TCEAL7Q9BRU2 100 aa14.49□□□□□ -0.09
COL6A2-208ENST00000485591 ATG101Q9BSB4 218 aa14.49□□□□□ -0.09
COL6A2-208ENST00000485591 TRBV7-9A0A0J9YWB2 115 aa14.48□□□□□ -0.09
COL6A2-208ENST00000485591 K7EQM0 130 aa14.48□□□□□ -0.09
COL6A2-208ENST00000485591 INSP01308 110 aa14.48□□□□□ -0.09
COL6A2-208ENST00000485591 ATP5G3P48201 142 aa14.48□□□□□ -0.09
COL6A2-208ENST00000485591 PMS2P11Q13670 270 aa14.48□□□□□ -0.09
COL6A2-208ENST00000485591 CYB561D1Q8N8Q1 229 aa14.48□□□□□ -0.09
COL6A2-208ENST00000485591 Q8TAT8 98 aa14.48□□□□□ -0.09
COL6A2-208ENST00000485591 GNG13Q9P2W3 67 aa14.48□□□□□ -0.09
COL6A2-208ENST00000485591 TRAV12-2A0A075B6T6 113 aa14.47□□□□□ -0.09
COL6A2-208ENST00000485591 CRISP2P16562 243 aa14.47□□□□□ -0.09
COL6A2-208ENST00000485591 ZNF705AQ6ZN79 300 aaPredicted RBP14.47□□□□□ -0.09
COL6A2-208ENST00000485591 ZNF680Q8NEM1 530 aa14.47□□□□□ -0.09
COL6A2-208ENST00000485591 LYPD6BQ8NI32 183 aa14.47□□□□□ -0.09
COL6A2-208ENST00000485591 HIST1H2BAQ96A08 127 aa14.47□□□□□ -0.09
COL6A2-208ENST00000485591 RARRES2Q99969 163 aa14.47□□□□□ -0.09
COL6A2-208ENST00000485591 LENEPQ9Y5L5 61 aa14.47□□□□□ -0.09
COL6A2-208ENST00000485591 PEX7O00628 323 aa14.46□□□□□ -0.09
COL6A2-208ENST00000485591 NMBP08949 121 aa14.46□□□□□ -0.09
COL6A2-208ENST00000485591 C1orf158Q8N1D5 194 aa14.46□□□□□ -0.09
COL6A2-208ENST00000485591 TMEM75Q8N9X5 138 aa14.46□□□□□ -0.09
COL6A2-208ENST00000485591 OR11H2Q8NH07 326 aa14.46□□□□□ -0.09
COL6A2-208ENST00000485591 GOLT1BQ9Y3E0 138 aa14.46□□□□□ -0.09
COL6A2-208ENST00000485591 COL7A1Q02388 2944 aa14.46□□□□□ -0.09
COL6A2-208ENST00000485591 TRAV8-1A0A0A6YYK1 113 aa14.45□□□□□ -0.1
COL6A2-208ENST00000485591 FBLL1A6NHQ2 334 aaKnown RBP14.45□□□□□ -0.1
COL6A2-208ENST00000485591 KLLNB2CW77 178 aa14.45□□□□□ -0.1
COL6A2-208ENST00000485591 IFNA1P01562 189 aa14.45□□□□□ -0.1
COL6A2-208ENST00000485591 KIR3DS1Q14943 382 aa14.45□□□□□ -0.1
COL6A2-208ENST00000485591 GFI1BQ5VTD9 330 aa14.45□□□□□ -0.1
COL6A2-208ENST00000485591 C20orf144Q9BQM9 153 aa14.45□□□□□ -0.1
COL6A2-208ENST00000485591 X6R8D5 127 aa14.45□□□□□ -0.1
COL6A2-208ENST00000485591 HUWE1Q7Z6Z7 4374 aaKnown RBP14.44□□□□□ -0.1
COL6A2-208ENST00000485591 TENM3Q9P273 2699 aa14.44□□□□□ -0.1
COL6A2-208ENST00000485591 C11orf94C9JXX5 98 aa14.44□□□□□ -0.1
COL6A2-208ENST00000485591 F6UZH7 168 aa14.44□□□□□ -0.1
COL6A2-208ENST00000485591 IGLV2-11P01706 119 aa14.44□□□□□ -0.1
COL6A2-208ENST00000485591 RBMY1A1P0DJD3 496 aaKnown RBP14.44□□□□□ -0.1
COL6A2-208ENST00000485591 RBMY1CP0DJD4 496 aa14.44□□□□□ -0.1
COL6A2-208ENST00000485591 RBMY1FQ15415 496 aaKnown RBP14.44□□□□□ -0.1
COL6A2-208ENST00000485591 ZFAND2AQ8N6M9 145 aa14.44□□□□□ -0.1
COL6A2-208ENST00000485591 TXNDC17Q9BRA2 123 aa14.44□□□□□ -0.1
COL6A2-208ENST00000485591 J3KRW8 73 aa14.43□□□□□ -0.1
COL6A2-208ENST00000485591 BCL2P10415 239 aa14.43□□□□□ -0.1
COL6A2-208ENST00000485591 FLI1Q01543 452 aaPredicted RBP14.43□□□□□ -0.1
COL6A2-208ENST00000485591 TMEM256Q8N2U0 113 aa14.43□□□□□ -0.1
COL6A2-208ENST00000485591 NEU1Q99519 415 aa14.43□□□□□ -0.1
COL6A2-208ENST00000485591 IGHV3OR16-12A0A075B7B8 117 aa14.42□□□□□ -0.1
COL6A2-208ENST00000485591 C7orf71A4D174 169 aa14.42□□□□□ -0.1
COL6A2-208ENST00000485591 GPX1P07203 203 aa14.42□□□□□ -0.1
COL6A2-208ENST00000485591 MIFP14174 115 aa14.42□□□□□ -0.1
COL6A2-208ENST00000485591 TAGLN2P37802 199 aaKnown RBP14.42□□□□□ -0.1
COL6A2-208ENST00000485591 SGK494Q96LW2 274 aa14.42□□□□□ -0.1
COL6A2-208ENST00000485591 TMEM208Q9BTX3 173 aa14.42□□□□□ -0.1
COL6A2-208ENST00000485591 PSG8Q9UQ74 426 aa14.42□□□□□ -0.1
COL6A2-208ENST00000485591 MEF2BQ02080 365 aaPredicted RBP14.41□□□□□ -0.1
COL6A2-208ENST00000485591 PRR9Q5T870 116 aa14.41□□□□□ -0.1
COL6A2-208ENST00000485591 Q8NAQ8 132 aa14.41□□□□□ -0.1
COL6A2-208ENST00000485591 TVP23CQ96ET8 276 aa14.41□□□□□ -0.1
COL6A2-208ENST00000485591 LINC00479Q96M42 142 aa14.41□□□□□ -0.1
COL6A2-208ENST00000485591 NDFIP1Q9BT67 221 aa14.41□□□□□ -0.1
COL6A2-208ENST00000485591 NBEAL2Q6ZNJ1 2754 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 TRAV12-3A0A0B4J271 114 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 SCO2A0A1W2PP80 73 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 SMIM9A6NGZ8 99 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 AKR1C3P42330 323 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 BTN1A1Q13410 526 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 FMC1Q96HJ9 113 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 TREM1Q9NP99 234 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 VAX2Q9UIW0 290 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 KLF12Q9Y4X4 402 aa14.4□□□□□ -0.1
COL6A2-208ENST00000485591 TRAV34A0A0B4J273 112 aa14.39□□□□□ -0.11
COL6A2-208ENST00000485591 LOC102723971A0A1B0GUV8 181 aa14.39□□□□□ -0.11
COL6A2-208ENST00000485591 H7BYZ3 331 aa14.39□□□□□ -0.11
COL6A2-208ENST00000485591 RNASE4P34096 147 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms