RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 CCL18P55774 89 aa11.12□□□□□ -0.63
SIK3-211ENST00000485363 H2BFSP57053 126 aa11.12□□□□□ -0.63
SIK3-211ENST00000485363 DEFA1P59665 94 aa11.12□□□□□ -0.63
SIK3-211ENST00000485363 DEFA3P59666 94 aa11.12□□□□□ -0.63
SIK3-211ENST00000485363 RNF141Q8WVD5 230 aa11.12□□□□□ -0.63
SIK3-211ENST00000485363 PPP1R1CQ8WVI7 109 aa11.12□□□□□ -0.63
SIK3-211ENST00000485363 FAM167A-AS1Q96KT0 104 aa11.12□□□□□ -0.63
SIK3-211ENST00000485363 MRPL32Q9BYC8 188 aaKnown RBP11.12□□□□□ -0.63
SIK3-211ENST00000485363 OR51M1Q9H341 326 aa11.12□□□□□ -0.63
SIK3-211ENST00000485363 SSNA1O43805 119 aa11.11□□□□□ -0.63
SIK3-211ENST00000485363 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
SIK3-211ENST00000485363 PET100P0DJ07 73 aa11.11□□□□□ -0.63
SIK3-211ENST00000485363 DAZ2Q13117 558 aaKnown RBP11.11□□□□□ -0.63
SIK3-211ENST00000485363 OR5I1Q13606 314 aa11.11□□□□□ -0.63
SIK3-211ENST00000485363 ICAM4Q14773 271 aa11.11□□□□□ -0.63
SIK3-211ENST00000485363 C1orf134Q5TEV5 83 aa11.11□□□□□ -0.63
SIK3-211ENST00000485363 FAM19A4Q96LR4 140 aa11.11□□□□□ -0.63
SIK3-211ENST00000485363 ATP5SQ99766 215 aa11.11□□□□□ -0.63
SIK3-211ENST00000485363 AGPAT4-IT1Q9H0P7 198 aa11.11□□□□□ -0.63
SIK3-211ENST00000485363 KLLNB2CW77 178 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 M6PRP20645 277 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 BTN1A1Q13410 526 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 TMEM78Q5T7P6 136 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 FAM122CQ6P4D5 195 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 C9orf47Q6ZRZ4 202 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 ZNF680Q8NEM1 530 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 ZNRF2Q8NHG8 242 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 GNPNAT1Q96EK6 184 aaPredicted RBP11.1□□□□□ -0.63
SIK3-211ENST00000485363 PAXXQ9BUH6 204 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 FUT9Q9Y231 359 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 PKD1P98161 4303 aa11.1□□□□□ -0.63
SIK3-211ENST00000485363 DYNC1H1Q14204 4646 aaKnown RBP11.09□□□□□ -0.63
SIK3-211ENST00000485363 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 IGKV2-40A0A087WW87 121 aaPredicted RBP11.09□□□□□ -0.63
SIK3-211ENST00000485363 ZNF324O75467 553 aaPredicted RBP11.09□□□□□ -0.63
SIK3-211ENST00000485363 MPC2O95563 127 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 IGKV2D-40P01614 121 aaPredicted RBP11.09□□□□□ -0.63
SIK3-211ENST00000485363 GPX1P07203 203 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 NMBP08949 121 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 OR10J4P0C629 311 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 CRISP2P16562 243 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 RNASE4P34096 147 aaKnown RBP11.09□□□□□ -0.63
SIK3-211ENST00000485363 CD300CQ08708 224 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 LINC00467Q9BRT7 94 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 LINC00588Q9Y4M8 146 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 HSPB11Q9Y547 144 aa11.09□□□□□ -0.63
SIK3-211ENST00000485363 NBDYA0A0U1RRE5 68 aa11.08□□□□□ -0.64
SIK3-211ENST00000485363 OR7C2O60412 319 aa11.08□□□□□ -0.64
SIK3-211ENST00000485363 HOXA5P20719 270 aa11.08□□□□□ -0.64
SIK3-211ENST00000485363 ANXA2RQ3ZCQ2 193 aa11.08□□□□□ -0.64
SIK3-211ENST00000485363 Q6ZTI0 123 aa11.08□□□□□ -0.64
SIK3-211ENST00000485363 EIF4E3Q8N5X7 224 aaKnown RBP11.08□□□□□ -0.64
SIK3-211ENST00000485363 RXFP4Q8TDU9 374 aa11.08□□□□□ -0.64
SIK3-211ENST00000485363 ZNF503Q96F45 646 aa11.08□□□□□ -0.64
SIK3-211ENST00000485363 DNAH11Q96DT5 4516 aa11.08□□□□□ -0.64
SIK3-211ENST00000485363 A0A0J9YY99 117 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 IFNA5P01569 189 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 RPL12P30050 165 aaKnown RBP11.07□□□□□ -0.64
SIK3-211ENST00000485363 FFAR4Q5NUL3 377 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 SSX7Q7RTT5 188 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 C11orf72Q8NBR9 251 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 SCGB1C1Q8TD33 95 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 PHYHIPLQ96FC7 376 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 VGLL1Q99990 258 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 GSN-AS1Q9NRJ2 163 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 ZNF492Q9P255 531 aa11.07□□□□□ -0.64
SIK3-211ENST00000485363 TRGV2A0A075B6R0 118 aa11.06□□□□□ -0.64
SIK3-211ENST00000485363 H3BNG1 76 aa11.06□□□□□ -0.64
SIK3-211ENST00000485363 CSN1S1P47710 185 aa11.06□□□□□ -0.64
SIK3-211ENST00000485363 LYPD1Q8N2G4 141 aa11.06□□□□□ -0.64
SIK3-211ENST00000485363 ZFAND2AQ8N6M9 145 aa11.06□□□□□ -0.64
SIK3-211ENST00000485363 SMIM3Q9BZL3 60 aa11.06□□□□□ -0.64
SIK3-211ENST00000485363 TMPRSS5Q9H3S3 457 aa11.06□□□□□ -0.64
SIK3-211ENST00000485363 TRGV1A0A0A0MS02 117 aa11.05□□□□□ -0.64
SIK3-211ENST00000485363 RGS13O14921 159 aa11.05□□□□□ -0.64
SIK3-211ENST00000485363 ZNF138P52744 262 aa11.05□□□□□ -0.64
SIK3-211ENST00000485363 TAS2R45P59539 299 aa11.05□□□□□ -0.64
SIK3-211ENST00000485363 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
SIK3-211ENST00000485363 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
SIK3-211ENST00000485363 KHDC3LQ587J8 217 aa11.05□□□□□ -0.64
SIK3-211ENST00000485363 C18orf15Q96N68 181 aa11.05□□□□□ -0.64
SIK3-211ENST00000485363 MBD2Q9UBB5 411 aa11.05□□□□□ -0.64
SIK3-211ENST00000485363 TRBV7-9A0A0J9YWB2 115 aa11.04□□□□□ -0.64
SIK3-211ENST00000485363 RBAKDNA6NC62 111 aa11.04□□□□□ -0.64
SIK3-211ENST00000485363 MED14OSP0DP75 135 aa11.04□□□□□ -0.64
SIK3-211ENST00000485363 TCL1AP56279 114 aa11.04□□□□□ -0.64
SIK3-211ENST00000485363 IBA57Q5T440 356 aaKnown RBP11.04□□□□□ -0.64
SIK3-211ENST00000485363 PRR9Q5T870 116 aa11.04□□□□□ -0.64
SIK3-211ENST00000485363 C6orf223Q8N319 242 aa11.04□□□□□ -0.64
SIK3-211ENST00000485363 Q9H3A6 140 aa11.04□□□□□ -0.64
SIK3-211ENST00000485363 IGHV1OR15-1A0A075B7D0 117 aa11.03□□□□□ -0.64
SIK3-211ENST00000485363 SPINK4O60575 86 aa11.03□□□□□ -0.64
SIK3-211ENST00000485363 Q8TAT8 98 aa11.03□□□□□ -0.64
SIK3-211ENST00000485363 ARPC5LQ9BPX5 153 aa11.03□□□□□ -0.64
SIK3-211ENST00000485363 Q9H8V8 135 aa11.03□□□□□ -0.64
SIK3-211ENST00000485363 BATF3Q9NR55 127 aa11.03□□□□□ -0.64
SIK3-211ENST00000485363 KLF12Q9Y4X4 402 aa11.03□□□□□ -0.64
SIK3-211ENST00000485363 TP53TG3Q9ULZ0 132 aa11.02□□□□□ -0.65
SIK3-211ENST00000485363 PCLOQ9Y6V0 5065 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms