RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 CHCHD1Q96BP2 118 aaKnown RBP1.66□□□□□ -2.14
RC3H1-205ENST00000484867 MCEEQ96PE7 176 aa1.66□□□□□ -2.14
RC3H1-205ENST00000484867 IMMP2LQ96T52 175 aa1.66□□□□□ -2.14
RC3H1-205ENST00000484867 NABP2Q9BQ15 211 aa1.66□□□□□ -2.14
RC3H1-205ENST00000484867 LINC00312Q9Y6C7 94 aa1.66□□□□□ -2.14
RC3H1-205ENST00000484867 CCDC18Q5T9S5 1454 aa1.66□□□□□ -2.14
RC3H1-205ENST00000484867 DNMBPQ6XZF7 1577 aa1.66□□□□□ -2.14
RC3H1-205ENST00000484867 MYO18AQ92614 2054 aaKnown RBP1.66□□□□□ -2.14
RC3H1-205ENST00000484867 CHD3Q12873 2000 aaKnown RBP1.66□□□□□ -2.14
RC3H1-205ENST00000484867 PSME4Q14997 1843 aa1.66□□□□□ -2.14
RC3H1-205ENST00000484867 SCAPERQ9BY12 1400 aa1.66□□□□□ -2.14
RC3H1-205ENST00000484867 NSD3Q9BZ95 1437 aa1.66□□□□□ -2.14
RC3H1-205ENST00000484867 SHROOM3Q8TF72 1996 aa1.65□□□□□ -2.14
RC3H1-205ENST00000484867 FBN3Q75N90 2809 aa1.65□□□□□ -2.14
RC3H1-205ENST00000484867 ADGRL2O95490 1459 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 MAGI1Q96QZ7 1491 aaPredicted RBP1.65□□□□□ -2.15
RC3H1-205ENST00000484867 KTN1Q86UP2 1357 aaKnown RBP1.65□□□□□ -2.15
RC3H1-205ENST00000484867 ANKRD36BQ8N2N9 1353 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 SMIM31A0A1B0GVY4 71 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 LOC107986453A0A1B0GWG9 222 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 M0R2P5 195 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 TCL1BO95988 128 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 ZNF705BP0CI00 300 aaPredicted RBP1.65□□□□□ -2.15
RC3H1-205ENST00000484867 FUSP35637 526 aaKnown RBP eCLIP1.65□□□□□ -2.15
RC3H1-205ENST00000484867 RPL28P46779 137 aaKnown RBP1.65□□□□□ -2.15
RC3H1-205ENST00000484867 KRTAP12-3P60328 96 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 PCBD1P61457 104 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 ZNF846Q147U1 533 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 SS18Q15532 418 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 Q5BKY6 102 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 FAM74A1Q5RGS3 127 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 FP248Q71RG6 208 aaPredicted RBP1.65□□□□□ -2.15
RC3H1-205ENST00000484867 OR5AS1Q8N127 324 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 CCL4L1Q8NHW4 92 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 C10orf105Q8TEF2 133 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 AQP3Q92482 292 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 MRPS24Q96EL2 167 aaKnown RBP1.65□□□□□ -2.15
RC3H1-205ENST00000484867 VAMP8Q9BV40 100 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 ATG5Q9H1Y0 275 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 MED9Q9NWA0 146 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 PLXND1Q9Y4D7 1925 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 KDM5DQ9BY66 1539 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 MYOM3Q5VTT5 1437 aa1.65□□□□□ -2.15
RC3H1-205ENST00000484867 NYNRINQ9P2P1 1898 aaKnown RBP1.65□□□□□ -2.15
RC3H1-205ENST00000484867 KDM5CP41229 1560 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 MED1Q15648 1581 aaPredicted RBP1.64□□□□□ -2.15
RC3H1-205ENST00000484867 A6NN06 94 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 B4DSR2 109 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 ZNF736B4DX44 427 aaPredicted RBP1.64□□□□□ -2.15
RC3H1-205ENST00000484867 RBP4P02753 201 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 LINC00032P0C843 101 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 DEFA4P12838 97 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 FABP4P15090 132 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 PEBP1P30086 187 aaKnown RBP1.64□□□□□ -2.15
RC3H1-205ENST00000484867 LSM3P62310 102 aaKnown RBP1.64□□□□□ -2.15
RC3H1-205ENST00000484867 CIRBPQ14011 172 aaKnown RBP1.64□□□□□ -2.15
RC3H1-205ENST00000484867 DEFB134Q4QY38 66 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 LYZL1Q6UWQ5 148 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 DPPA3Q6W0C5 159 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 Q8IYB0 196 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 DYNAPQ8N1N2 210 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 CMTM2Q8TAZ6 248 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 FGF13Q92913 245 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 AQP10Q96PS8 301 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 NPVFQ9HCQ7 196 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 BET1LQ9NYM9 111 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 NOP16Q9Y3C1 178 aaKnown RBP1.64□□□□□ -2.15
RC3H1-205ENST00000484867 MINOS1-NBL1R4GNA1 71 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 NUP210Q8TEM1 1887 aaPredicted RBP1.64□□□□□ -2.15
RC3H1-205ENST00000484867 CDK5RAP2Q96SN8 1893 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 ERICH3Q5RHP9 1530 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 TROQ12816 1431 aaPredicted RBP1.64□□□□□ -2.15
RC3H1-205ENST00000484867 CEP162Q5TB80 1403 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 MYH4Q9Y623 1939 aa1.64□□□□□ -2.15
RC3H1-205ENST00000484867 ECM29Q5VYK3 1845 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 COL1A1P02452 1464 aaPredicted RBP1.63□□□□□ -2.15
RC3H1-205ENST00000484867 SHANK3Q9BYB0 1731 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 DOCK4Q8N1I0 1966 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 DLC1Q96QB1 1528 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 A0A1W2PNM2 257 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 H3BQ15 152 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 SDCBPO00560 298 aaPredicted RBP1.63□□□□□ -2.15
RC3H1-205ENST00000484867 GNRH2O43555 120 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 CREBL2O60519 120 aaPredicted RBP1.63□□□□□ -2.15
RC3H1-205ENST00000484867 TIMM17BO60830 172 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 HYPMO75409 117 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 NDUFB6O95139 128 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 IGLV1-51P01701 117 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 SHBGP04278 402 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 MSMBP08118 114 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 ETV6P41212 452 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 PYDC2Q56P42 97 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 KHDC3LQ587J8 217 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 C6orf52Q5T4I8 152 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 ATP11AUNQ6ZP68 121 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 Q6ZQT0 140 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 OR5AK2Q8NH90 309 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 CLEC2BQ92478 149 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 PSMF1Q92530 271 aa1.63□□□□□ -2.15
RC3H1-205ENST00000484867 RAB37Q96AX2 223 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 1243.6 ms