RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 OR5C1Q8NGR4 320 aa10.66□□□□□ -0.7
HLA-DQB1-208ENST00000484729 GNPNAT1Q96EK6 184 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB1-208ENST00000484729 SRRM2Q9UQ35 2752 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB1-208ENST00000484729 TRAV26-1A0A087WT03 109 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 FXYD6-FXYD2A0A087WZ82 144 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 TRAV5A0A0B4J249 113 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 GAGE12BA1L429 117 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 SNURFLB1AK76 121 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 GAGE7O76087 117 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 GAGE12FP0CL80 117 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 GAGE12GP0CL81 117 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 GAGE12IP0CL82 117 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 LEPP41159 167 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 ATP6V1FQ16864 119 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 Q6ZNX1 250 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 DNAJC4Q9NNZ3 241 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 HSPB11Q9Y547 144 aa10.65□□□□□ -0.7
HLA-DQB1-208ENST00000484729 TRAV12-3A0A0B4J271 114 aa10.64□□□□□ -0.71
HLA-DQB1-208ENST00000484729 A0A0J9YY99 117 aa10.64□□□□□ -0.71
HLA-DQB1-208ENST00000484729 GUK1Q16774 197 aa10.64□□□□□ -0.71
HLA-DQB1-208ENST00000484729 LINC00612Q8N6U2 182 aa10.64□□□□□ -0.71
HLA-DQB1-208ENST00000484729 CHAC2Q8WUX2 184 aa10.64□□□□□ -0.71
HLA-DQB1-208ENST00000484729 SAT2Q96F10 170 aaPredicted RBP10.64□□□□□ -0.71
HLA-DQB1-208ENST00000484729 PFDN5Q99471 154 aa10.64□□□□□ -0.71
HLA-DQB1-208ENST00000484729 KRTAP1-5Q9BYS1 174 aa10.64□□□□□ -0.71
HLA-DQB1-208ENST00000484729 WDR83OSQ9Y284 106 aa10.64□□□□□ -0.71
HLA-DQB1-208ENST00000484729 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
HLA-DQB1-208ENST00000484729 CT45A10P0DMU9 189 aa10.63□□□□□ -0.71
HLA-DQB1-208ENST00000484729 M6PRP20645 277 aa10.63□□□□□ -0.71
HLA-DQB1-208ENST00000484729 FGF7P21781 194 aa10.63□□□□□ -0.71
HLA-DQB1-208ENST00000484729 VWC2Q2TAL6 325 aa10.63□□□□□ -0.71
HLA-DQB1-208ENST00000484729 Q5BKY6 102 aa10.63□□□□□ -0.71
HLA-DQB1-208ENST00000484729 ODF3Q96PU9 254 aa10.63□□□□□ -0.71
HLA-DQB1-208ENST00000484729 SMIM3Q9BZL3 60 aa10.63□□□□□ -0.71
HLA-DQB1-208ENST00000484729 INO80EQ8NBZ0 244 aaPredicted RBP10.62□□□□□ -0.71
HLA-DQB1-208ENST00000484729 RXFP4Q8TDU9 374 aa10.62□□□□□ -0.71
HLA-DQB1-208ENST00000484729 ATP5SQ99766 215 aa10.62□□□□□ -0.71
HLA-DQB1-208ENST00000484729 Q9H8V8 135 aa10.62□□□□□ -0.71
HLA-DQB1-208ENST00000484729 SLC39A9Q9NUM3 307 aa10.62□□□□□ -0.71
HLA-DQB1-208ENST00000484729 ZNF586Q9NXT0 402 aa10.62□□□□□ -0.71
HLA-DQB1-208ENST00000484729 SMLR1H3BR10 107 aa10.61□□□□□ -0.71
HLA-DQB1-208ENST00000484729 ZNF253O75346 499 aa10.61□□□□□ -0.71
HLA-DQB1-208ENST00000484729 MPDU1O75352 247 aa10.61□□□□□ -0.71
HLA-DQB1-208ENST00000484729 HOXA5P20719 270 aa10.61□□□□□ -0.71
HLA-DQB1-208ENST00000484729 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.71
HLA-DQB1-208ENST00000484729 TTC32Q5I0X7 151 aa10.61□□□□□ -0.71
HLA-DQB1-208ENST00000484729 PYGO2Q9BRQ0 406 aa10.61□□□□□ -0.71
HLA-DQB1-208ENST00000484729 FLG2Q5D862 2391 aaPredicted RBP10.61□□□□□ -0.71
HLA-DQB1-208ENST00000484729 M0R3E3 92 aa10.6□□□□□ -0.71
HLA-DQB1-208ENST00000484729 IFNA5P01569 189 aa10.6□□□□□ -0.71
HLA-DQB1-208ENST00000484729 RPL29P47914 159 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB1-208ENST00000484729 Q6ZTI0 123 aa10.6□□□□□ -0.71
HLA-DQB1-208ENST00000484729 MRPL53Q96EL3 112 aaKnown RBP10.6□□□□□ -0.71
HLA-DQB1-208ENST00000484729 ZNF503Q96F45 646 aa10.6□□□□□ -0.71
HLA-DQB1-208ENST00000484729 AQP10Q96PS8 301 aa10.6□□□□□ -0.71
HLA-DQB1-208ENST00000484729 TMPRSS5Q9H3S3 457 aa10.6□□□□□ -0.71
HLA-DQB1-208ENST00000484729 MYCBP2O75592 4640 aa10.6□□□□□ -0.71
HLA-DQB1-208ENST00000484729 TRBV19A0A075B6N1 114 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 C7orf71A4D174 169 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 ERCC8Q13216 396 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 Q5VSD8 79 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 LYPD1Q8N2G4 141 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 SCGB1C1Q8TD33 95 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 NPCDR1Q9BY65 106 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 KCNIP2Q9NS61 270 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 TNFSF18Q9UNG2 199 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 TIMM9Q9Y5J7 89 aa10.59□□□□□ -0.71
HLA-DQB1-208ENST00000484729 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 C17orf112F2Z3M2 114 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 G3V3Q6 166 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 ARPC5O15511 151 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 SLC25A5P05141 298 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 PYYP10082 97 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 XGP55808 180 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 BTN1A1Q13410 526 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 ESRGQ1W209 222 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 AKAP14Q86UN6 197 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 ZNF680Q8NEM1 530 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 BLNKQ8WV28 456 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 WDR61Q9GZS3 305 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 GSN-AS1Q9NRJ2 163 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 TMEM14CQ9P0S9 112 aa10.58□□□□□ -0.72
HLA-DQB1-208ENST00000484729 H3BNG1 76 aa10.57□□□□□ -0.72
HLA-DQB1-208ENST00000484729 NDUFB4O95168 129 aa10.57□□□□□ -0.72
HLA-DQB1-208ENST00000484729 HIST1H1EP10412 219 aaKnown RBP10.57□□□□□ -0.72
HLA-DQB1-208ENST00000484729 BTF3P20290 206 aaKnown RBP10.57□□□□□ -0.72
HLA-DQB1-208ENST00000484729 UPK3BQ9BT76 320 aa10.57□□□□□ -0.72
HLA-DQB1-208ENST00000484729 Q9H3A6 140 aa10.57□□□□□ -0.72
HLA-DQB1-208ENST00000484729 PRELID1Q9Y255 219 aa10.57□□□□□ -0.72
HLA-DQB1-208ENST00000484729 MRPS16Q9Y3D3 137 aaKnown RBP10.57□□□□□ -0.72
HLA-DQB1-208ENST00000484729 FAT1Q14517 4588 aa10.56□□□□□ -0.72
HLA-DQB1-208ENST00000484729 TRGV1A0A0A0MS02 117 aa10.56□□□□□ -0.72
HLA-DQB1-208ENST00000484729 RNF222A6NCQ9 220 aa10.56□□□□□ -0.72
HLA-DQB1-208ENST00000484729 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
HLA-DQB1-208ENST00000484729 CD300CQ08708 224 aa10.56□□□□□ -0.72
HLA-DQB1-208ENST00000484729 ZNF266Q14584 549 aa10.56□□□□□ -0.72
HLA-DQB1-208ENST00000484729 GCSAMLQ5JQS6 135 aa10.56□□□□□ -0.72
HLA-DQB1-208ENST00000484729 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms