RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 GCSAMLQ5JQS6 135 aa13.86□□□□□ -0.19
HPS4-213ENST00000483631 THAP6Q8TBB0 222 aa13.86□□□□□ -0.19
HPS4-213ENST00000483631 C18orf15Q96N68 181 aa13.86□□□□□ -0.19
HPS4-213ENST00000483631 MARVELD1Q9BSK0 173 aa13.86□□□□□ -0.19
HPS4-213ENST00000483631 WDR61Q9GZS3 305 aaKnown RBP13.86□□□□□ -0.19
HPS4-213ENST00000483631 OR5AC2Q9NZP5 309 aa13.86□□□□□ -0.19
HPS4-213ENST00000483631 RYR1P21817 5038 aa13.85□□□□□ -0.19
HPS4-213ENST00000483631 PKD1P98161 4303 aa13.85□□□□□ -0.19
HPS4-213ENST00000483631 NBDYA0A0U1RRE5 68 aa13.85□□□□□ -0.19
HPS4-213ENST00000483631 H0YIZ8 118 aa13.85□□□□□ -0.19
HPS4-213ENST00000483631 ANXA2RQ3ZCQ2 193 aa13.85□□□□□ -0.19
HPS4-213ENST00000483631 RXFP4Q8TDU9 374 aa13.85□□□□□ -0.19
HPS4-213ENST00000483631 GNPNAT1Q96EK6 184 aaPredicted RBP13.85□□□□□ -0.19
HPS4-213ENST00000483631 AGPAT4-IT1Q9H0P7 198 aa13.85□□□□□ -0.19
HPS4-213ENST00000483631 KIAA1109Q2LD37 5005 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 TRBV7-9A0A0J9YWB2 115 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 C17orf112F2Z3M2 114 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 J3KRW8 73 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 ZNF324O75467 553 aaPredicted RBP13.84□□□□□ -0.19
HPS4-213ENST00000483631 NBEAP1P0C6P0 100 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 PET100P0DJ07 73 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 IFITM3Q01628 133 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 CLINT1Q14677 625 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 LRRC37A5PQ49AS3 106 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 BLNKQ8WV28 456 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 OR51M1Q9H341 326 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 LINC00588Q9Y4M8 146 aa13.84□□□□□ -0.19
HPS4-213ENST00000483631 MUC4Q99102 2169 aa13.83□□□□□ -0.19
HPS4-213ENST00000483631 TRAV26-1A0A087WT03 109 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 GAGE12BA1L429 117 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 GAGE7O76087 117 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 GAGE12FP0CL80 117 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 GAGE12GP0CL81 117 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 GAGE12IP0CL82 117 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 ERCC8Q13216 396 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 OR5I1Q13606 314 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 ICAM4Q14773 271 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 TMEM78Q5T7P6 136 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 MIR17HGQ75NE6 70 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 EXOC3-AS1Q8N2X6 119 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 EIF4E3Q8N5X7 224 aaKnown RBP13.83□□□□□ -0.2
HPS4-213ENST00000483631 C11orf72Q8NBR9 251 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 PPP1R1CQ8WVI7 109 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 FUT9Q9Y231 359 aa13.83□□□□□ -0.2
HPS4-213ENST00000483631 H2BFSP57053 126 aa13.82□□□□□ -0.2
HPS4-213ENST00000483631 SSX7Q7RTT5 188 aa13.82□□□□□ -0.2
HPS4-213ENST00000483631 LYPD1Q8N2G4 141 aa13.82□□□□□ -0.2
HPS4-213ENST00000483631 ATP5SQ99766 215 aa13.82□□□□□ -0.2
HPS4-213ENST00000483631 PAXXQ9BUH6 204 aa13.82□□□□□ -0.2
HPS4-213ENST00000483631 GPX1P07203 203 aa13.81□□□□□ -0.2
HPS4-213ENST00000483631 HOXA5P20719 270 aa13.81□□□□□ -0.2
HPS4-213ENST00000483631 DEFA1P59665 94 aa13.81□□□□□ -0.2
HPS4-213ENST00000483631 DEFA3P59666 94 aa13.81□□□□□ -0.2
HPS4-213ENST00000483631 IBA57Q5T440 356 aaKnown RBP13.81□□□□□ -0.2
HPS4-213ENST00000483631 FXYD5Q96DB9 178 aa13.81□□□□□ -0.2
HPS4-213ENST00000483631 UPK3BQ9BT76 320 aa13.81□□□□□ -0.2
HPS4-213ENST00000483631 ZNF492Q9P255 531 aa13.81□□□□□ -0.2
HPS4-213ENST00000483631 DYNC1H1Q14204 4646 aaKnown RBP13.81□□□□□ -0.2
HPS4-213ENST00000483631 CD300CQ08708 224 aa13.8□□□□□ -0.2
HPS4-213ENST00000483631 BTN1A1Q13410 526 aa13.8□□□□□ -0.2
HPS4-213ENST00000483631 Q6ZTI0 123 aa13.8□□□□□ -0.2
HPS4-213ENST00000483631 C6orf223Q8N319 242 aa13.8□□□□□ -0.2
HPS4-213ENST00000483631 ZFAND2AQ8N6M9 145 aa13.8□□□□□ -0.2
HPS4-213ENST00000483631 GSN-AS1Q9NRJ2 163 aa13.8□□□□□ -0.2
HPS4-213ENST00000483631 HSPB11Q9Y547 144 aa13.8□□□□□ -0.2
HPS4-213ENST00000483631 RBAKDNA6NC62 111 aa13.79□□□□□ -0.2
HPS4-213ENST00000483631 MPC2O95563 127 aa13.79□□□□□ -0.2
HPS4-213ENST00000483631 RNASE4P34096 147 aaKnown RBP13.79□□□□□ -0.2
HPS4-213ENST00000483631 TCL1AP56279 114 aa13.79□□□□□ -0.2
HPS4-213ENST00000483631 FAM122CQ6P4D5 195 aa13.79□□□□□ -0.2
HPS4-213ENST00000483631 IGKV2-40A0A087WW87 121 aaPredicted RBP13.78□□□□□ -0.2
HPS4-213ENST00000483631 SSNA1O43805 119 aa13.78□□□□□ -0.2
HPS4-213ENST00000483631 IGKV2D-40P01614 121 aaPredicted RBP13.78□□□□□ -0.2
HPS4-213ENST00000483631 BTF3P20290 206 aaKnown RBP13.78□□□□□ -0.2
HPS4-213ENST00000483631 CSN1S1P47710 185 aa13.78□□□□□ -0.2
HPS4-213ENST00000483631 ZNF138P52744 262 aa13.78□□□□□ -0.2
HPS4-213ENST00000483631 TTC32Q5I0X7 151 aa13.78□□□□□ -0.2
HPS4-213ENST00000483631 VGLL1Q99990 258 aa13.78□□□□□ -0.2
HPS4-213ENST00000483631 TMPRSS5Q9H3S3 457 aa13.78□□□□□ -0.2
HPS4-213ENST00000483631 Q9H8V8 135 aa13.78□□□□□ -0.2
HPS4-213ENST00000483631 TRGV2A0A075B6R0 118 aa13.77□□□□□ -0.21
HPS4-213ENST00000483631 A0A1W2PPQ1 181 aa13.77□□□□□ -0.21
HPS4-213ENST00000483631 OR7C2O60412 319 aa13.77□□□□□ -0.21
HPS4-213ENST00000483631 SPINK4O60575 86 aa13.77□□□□□ -0.21
HPS4-213ENST00000483631 OR10J4P0C629 311 aa13.77□□□□□ -0.21
HPS4-213ENST00000483631 TAS2R45P59539 299 aa13.77□□□□□ -0.21
HPS4-213ENST00000483631 PHYHIPLQ96FC7 376 aa13.77□□□□□ -0.21
HPS4-213ENST00000483631 LENEPQ9Y5L5 61 aa13.77□□□□□ -0.21
HPS4-213ENST00000483631 IGHV1OR15-1A0A075B7D0 117 aa13.76□□□□□ -0.21
HPS4-213ENST00000483631 A0A0J9YY99 117 aa13.76□□□□□ -0.21
HPS4-213ENST00000483631 RGS13O14921 159 aa13.76□□□□□ -0.21
HPS4-213ENST00000483631 IFNA5P01569 189 aa13.76□□□□□ -0.21
HPS4-213ENST00000483631 KHDC3LQ587J8 217 aa13.76□□□□□ -0.21
HPS4-213ENST00000483631 SCGB1C1Q8TD33 95 aa13.76□□□□□ -0.21
HPS4-213ENST00000483631 MRPS16Q9Y3D3 137 aaKnown RBP13.76□□□□□ -0.21
HPS4-213ENST00000483631 TRGV1A0A0A0MS02 117 aa13.75□□□□□ -0.21
HPS4-213ENST00000483631 RPL12P30050 165 aaKnown RBP13.75□□□□□ -0.21
HPS4-213ENST00000483631 FFAR4Q5NUL3 377 aa13.75□□□□□ -0.21
HPS4-213ENST00000483631 Q9H3A6 140 aa13.75□□□□□ -0.21
HPS4-213ENST00000483631 RANP62826 216 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms