RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SIGLECL1Q8N7X8 197 aa10.09□□□□□ -0.79
CPNE1-225ENST00000483495 PGLYRP4Q96LB8 373 aa10.09□□□□□ -0.79
CPNE1-225ENST00000483495 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
CPNE1-225ENST00000483495 A8MWP6 167 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 SOCS3O14543 225 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 SH2D1AO60880 128 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 SLAQ13239 276 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 FAM106AQ4KMX7 169 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 TMEM256Q8N2U0 113 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 Q8TAT8 98 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 PPP1R14DQ9NXH3 145 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 A0A1B0GUS0 222 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 HAX1O00165 279 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 RPLP1P05386 114 aaKnown RBP10.08□□□□□ -0.8
CPNE1-225ENST00000483495 GZMBP10144 247 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 BMI1P35226 326 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 LINC00310P59036 64 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 SRSF2Q01130 221 aaKnown RBP10.08□□□□□ -0.8
CPNE1-225ENST00000483495 ERCC8Q13216 396 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 OR10J3Q5JRS4 329 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 Q6AWC8 147 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 NDFIP1Q9BT67 221 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 SMPXQ9UHP9 88 aa10.08□□□□□ -0.8
CPNE1-225ENST00000483495 TEX15Q9BXT5 2789 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 NUPR1O60356 82 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 KRTAP1-1Q07627 177 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 KIAA1644Q3SXP7 199 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 TM4SF20Q53R12 229 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 C9orf47Q6ZRZ4 202 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 C16orf92Q96LL3 132 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 RHPN1-AS1Q9BWJ2 59 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 PDZD2O15018 2839 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 MXRA5Q9NR99 2828 aa10.07□□□□□ -0.8
CPNE1-225ENST00000483495 LGALS1P09382 135 aaKnown RBP10.06□□□□□ -0.8
CPNE1-225ENST00000483495 CAMPP49913 170 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 ZNF80P51504 273 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-225ENST00000483495 UBE2E2Q96LR5 201 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 NRN1Q9NPD7 142 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 UFC1Q9Y3C8 167 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 HELZ2Q9BYK8 2649 aaKnown RBP10.06□□□□□ -0.8
CPNE1-225ENST00000483495 ITPR3Q14573 2671 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 TMEM189A5PLL7 270 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 SRIP30626 198 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 JOSD1Q15040 202 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-225ENST00000483495 IL17RELQ6ZVW7 336 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 ZNF469Q96JG9 3925 aaPredicted RBP10.06□□□□□ -0.8
CPNE1-225ENST00000483495 C20orf173Q96LM9 149 aa10.06□□□□□ -0.8
CPNE1-225ENST00000483495 A0A1B0GUT8 65 aa10.05□□□□□ -0.8
CPNE1-225ENST00000483495 A0A1B0GW15 77 aa10.05□□□□□ -0.8
CPNE1-225ENST00000483495 CD5LO43866 347 aa10.05□□□□□ -0.8
CPNE1-225ENST00000483495 SERF1AO75920 110 aa10.05□□□□□ -0.8
CPNE1-225ENST00000483495 ZNF138P52744 262 aa10.05□□□□□ -0.8
CPNE1-225ENST00000483495 RPS20P60866 119 aaKnown RBP10.05□□□□□ -0.8
CPNE1-225ENST00000483495 FABP5P3A8MUU1 101 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 KLF5Q13887 457 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-225ENST00000483495 TMEM78Q5T7P6 136 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 REC114Q7Z4M0 266 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 ZNF575Q86XF7 245 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 SSBP4Q9BWG4 385 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-225ENST00000483495 LENEPQ9Y5L5 61 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 F2Z2F3 143 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 LGALS9O00182 355 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 PAFAH1B2P68402 229 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 RIGQ13278 110 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 DUX5Q96PT3 197 aa10.04□□□□□ -0.8
CPNE1-225ENST00000483495 ALKBH7Q9BT30 221 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-225ENST00000483495 TMEM213A2RRL7 107 aa10.03□□□□□ -0.8
CPNE1-225ENST00000483495 OVOL1O14753 267 aa10.03□□□□□ -0.8
CPNE1-225ENST00000483495 ARMS2P0C7Q2 107 aa10.03□□□□□ -0.8
CPNE1-225ENST00000483495 LINC01559Q495D7 138 aa10.03□□□□□ -0.8
CPNE1-225ENST00000483495 SAMD13Q5VXD3 122 aa10.03□□□□□ -0.8
CPNE1-225ENST00000483495 ZNF738Q8NE65 137 aa10.03□□□□□ -0.8
CPNE1-225ENST00000483495 C18orf32Q8TCD1 76 aa10.03□□□□□ -0.8
CPNE1-225ENST00000483495 HIST1H1AQ02539 215 aaPredicted RBP10.02□□□□□ -0.8
CPNE1-225ENST00000483495 LINC00477Q96M19 166 aa10.02□□□□□ -0.8
CPNE1-225ENST00000483495 IGHV4OR15-8A0A075B7B6 117 aa10.02□□□□□ -0.81
CPNE1-225ENST00000483495 A0A087WW49 117 aa10.02□□□□□ -0.81
CPNE1-225ENST00000483495 IGLC6P0CF74 106 aa10.02□□□□□ -0.81
CPNE1-225ENST00000483495 EDN2P20800 178 aa10.02□□□□□ -0.81
CPNE1-225ENST00000483495 CTRLP40313 264 aa10.02□□□□□ -0.81
CPNE1-225ENST00000483495 FAM181BA6NEQ2 426 aa10.01□□□□□ -0.81
CPNE1-225ENST00000483495 DNAJC9-AS1A6NH13 148 aa10.01□□□□□ -0.81
CPNE1-225ENST00000483495 RPL11P62913 178 aaKnown RBP10.01□□□□□ -0.81
CPNE1-225ENST00000483495 LYZL1Q6UWQ5 148 aa10.01□□□□□ -0.81
CPNE1-225ENST00000483495 ZNF493Q6ZR52 646 aa10.01□□□□□ -0.81
CPNE1-225ENST00000483495 KLHDC1Q8N7A1 406 aa10.01□□□□□ -0.81
CPNE1-225ENST00000483495 BORCS7Q96B45 105 aa10.01□□□□□ -0.81
CPNE1-225ENST00000483495 RCHY1Q96PM5 261 aa10.01□□□□□ -0.81
CPNE1-225ENST00000483495 TMSB15BA0A087X1C1 80 aa10□□□□□ -0.81
CPNE1-225ENST00000483495 LOC102724200A0A096LPH7 203 aaPredicted RBP10□□□□□ -0.81
CPNE1-225ENST00000483495 OR10J6PQ8NGY7 276 aa10□□□□□ -0.81
CPNE1-225ENST00000483495 DCANP1Q8TF63 244 aa10□□□□□ -0.81
CPNE1-225ENST00000483495 KCNS1Q96KK3 526 aa10□□□□□ -0.81
CPNE1-225ENST00000483495 UNC79Q9P2D8 2635 aa10□□□□□ -0.81
CPNE1-225ENST00000483495 CCDC168Q8NDH2 2452 aa10□□□□□ -0.81
CPNE1-225ENST00000483495 ORM1P02763 201 aa10□□□□□ -0.81
CPNE1-225ENST00000483495 HOXD3P31249 432 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms