RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 UPK3BQ9BT76 320 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 GGACTQ9BVM4 153 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 NAA50Q9GZZ1 169 aaKnown RBP5.1□□□□□ -1.59
CSDE1-206ENST00000483030 MIXL1Q9H2W2 232 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 GEMIN7Q9H840 131 aaKnown RBP5.1□□□□□ -1.59
CSDE1-206ENST00000483030 DMBT1Q9UGM3 2413 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-206ENST00000483030 A0A1B0GV72 72 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 FAM240BA0A1B0GVZ2 78 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 A0A1B0GW15 77 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 GAGE12BA1L429 117 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 K7EP13 123 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 RGS5O15539 181 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 PITX3O75364 302 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 GAGE7O76087 117 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 GAGE12FP0CL80 117 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 GAGE12GP0CL81 117 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 GAGE12IP0CL82 117 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 SCGB1A1P11684 91 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 ANXA3P12429 323 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 RPL7P18124 248 aaKnown RBP5.09□□□□□ -1.59
CSDE1-206ENST00000483030 CXCL3P19876 107 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 HOXA5P20719 270 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 S100A7P31151 101 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 XGP55808 180 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 MRPS10P82664 201 aaKnown RBP5.09□□□□□ -1.59
CSDE1-206ENST00000483030 ZNF846Q147U1 533 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 KIR3DS1Q14943 382 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 CTF1Q16619 201 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 LYPD1Q8N2G4 141 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 RNASE8Q8TDE3 154 aaKnown RBP5.09□□□□□ -1.59
CSDE1-206ENST00000483030 TMEM263Q8WUH6 116 aaKnown RBP5.09□□□□□ -1.59
CSDE1-206ENST00000483030 SMIM4Q8WVI0 70 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 ZNF503Q96F45 646 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 SCGB3A2Q96PL1 93 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 SHANK2-AS3Q9BTD1 123 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 SCP2D1Q9UJQ7 156 aa5.09□□□□□ -1.59
CSDE1-206ENST00000483030 MRPS16Q9Y3D3 137 aaKnown RBP5.09□□□□□ -1.59
CSDE1-206ENST00000483030 ANKRD20A5PA0PJZ0 165 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 FBLL1A6NHQ2 334 aaKnown RBP5.08□□□□□ -1.6
CSDE1-206ENST00000483030 PRSS46E5RG02 174 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 H3BRN7 92 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 H7BYZ3 331 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 HYPMO75409 117 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 ADAP1O75689 374 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 IL5P05113 134 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 FGF8P55075 233 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-206ENST00000483030 LINC00315P59091 139 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 RAP2BP61225 183 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 SRPXP78539 464 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 AKR1C1Q04828 323 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 ZFP69Q49AA0 526 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 SPANXN5Q5MJ07 72 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 Q6ZRN7 208 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-206ENST00000483030 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 ZFP82Q8N141 532 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 LINC00612Q8N6U2 182 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 RPUSD4Q96CM3 377 aaKnown RBP5.08□□□□□ -1.6
CSDE1-206ENST00000483030 C1orf43Q9BWL3 253 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 MCUBQ9NWR8 336 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 HIGD1AQ9Y241 93 aa5.08□□□□□ -1.6
CSDE1-206ENST00000483030 KRBOX1C9JBD0 128 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 H3BNG1 76 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 CTDSPLO15194 276 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 SYNGR2O43760 224 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 EIF3GO75821 320 aaKnown RBP eCLIP5.07□□□□□ -1.6
CSDE1-206ENST00000483030 SCO1O75880 301 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 PTTG1O95997 202 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 RLN2P04090 185 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 SNRPCP09234 159 aaKnown RBP5.07□□□□□ -1.6
CSDE1-206ENST00000483030 OR5G3P0C626 314 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 SMIM18P0DKX4 95 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 ANXA7P20073 488 aaKnown RBP5.07□□□□□ -1.6
CSDE1-206ENST00000483030 BTN1A1Q13410 526 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 Q5VSD8 79 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 CYP2G1PQ6ZSU1 146 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 MRPL52Q86TS9 123 aaKnown RBP5.07□□□□□ -1.6
CSDE1-206ENST00000483030 HSD17B11Q8NBQ5 300 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 S100ZQ8WXG8 99 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 FRZBQ92765 325 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 SMIM12Q96EX1 92 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 SAT2Q96F10 170 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-206ENST00000483030 DIRAS2Q96HU8 199 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 VSIG2Q96IQ7 327 aa5.07□□□□□ -1.6
CSDE1-206ENST00000483030 CIB3Q96Q77 187 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-206ENST00000483030 A0A087WWL8 130 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 A0A087X0K7 114 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 A0A096LPF7 62 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 PIGBOS1A0A0B4J2F0 54 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 DUXBA0A1W2PPF3 345 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 SMCO3A2RU48 225 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 GAGE10A6NGK3 116 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 PMS2P5A8MQ11 134 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 SNURFLB1AK76 121 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 H3BP45 60 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 SMLR1H3BR10 107 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 SIVA1O15304 175 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 SMR3BP02814 79 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-206ENST00000483030 METTL15P1P0C7V9 234 aa5.06□□□□□ -1.6
CSDE1-206ENST00000483030 LINC00869P0C866 280 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms