RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 IGKV3OR2-268A0A0C4DH90 116 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 F8W1H4 67 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 TRACP01848 142 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 DBIP07108 87 aaKnown RBP1.26□□□□□ -2.21
SNX27-205ENST00000482791 FREM3P0C091 2139 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 MIR22HGQ0VDD5 57 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 SPRNQ5BIV9 151 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 FAM74A1Q5RGS3 127 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 ZCCHC23Q6ZST2 131 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 BORCS5Q969J3 196 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 AP1S3Q96PC3 154 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 NABP2Q9BQ15 211 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 CYSTM1Q9H1C7 97 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 ORMDL1Q9P0S3 153 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 SNURFQ9Y675 71 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 SIP14410 1827 aa1.26□□□□□ -2.21
SNX27-205ENST00000482791 UNC13CQ8NB66 2214 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 KDM5CP41229 1560 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 CHD3Q12873 2000 aaKnown RBP1.25□□□□□ -2.21
SNX27-205ENST00000482791 TRBV6-4A0A1B0GX49 114 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 DNAL4O96015 105 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 HBDP02042 147 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 SLC25A4P12235 298 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 ZNF25P17030 456 aaPredicted RBP1.25□□□□□ -2.21
SNX27-205ENST00000482791 BLCAPP62952 87 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 PSPHP78330 225 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 S100A12P80511 92 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 HIST1H1AQ02539 215 aaPredicted RBP1.25□□□□□ -2.21
SNX27-205ENST00000482791 SMIM21Q3B7S5 101 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 MORN2Q502X0 79 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 HSD17B12Q53GQ0 312 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 FOXI2Q6ZQN5 318 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 OR5AK2Q8NH90 309 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 FAM107BQ9H098 131 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 CST11Q9H112 138 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 CALML5Q9NZT1 146 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 MED13Q9UHV7 2174 aa1.25□□□□□ -2.21
SNX27-205ENST00000482791 CECR2Q9BXF3 1484 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 CDK5RAP2Q96SN8 1893 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 FANCMQ8IYD8 2048 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 IGKV3-7A0A075B6H7 116 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 LOC110117498A0A087WWA1 95 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 LOC107984156A0A0G2JMH3 177 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 C3orf85A0A1B0GTC6 90 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 LOC107986453A0A1B0GWG9 222 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 UQCRQO14949 82 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 CCL25O15444 150 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 SAA1P0DJI8 122 aaPredicted RBP1.24□□□□□ -2.21
SNX27-205ENST00000482791 MPV17LQ2QL34 196 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 HAGHLQ6PII5 290 aaPredicted RBP1.24□□□□□ -2.21
SNX27-205ENST00000482791 TEN1Q86WV5 123 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 ARL17AQ8IVW1 177 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 OBSCN-AS1Q96MR7 158 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 BANF2Q9H503 90 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 ZFP30Q9Y2G7 519 aa1.24□□□□□ -2.21
SNX27-205ENST00000482791 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.23□□□□□ -2.21
SNX27-205ENST00000482791 TRPM7Q96QT4 1865 aa1.23□□□□□ -2.21
SNX27-205ENST00000482791 SYNJ1O43426 1573 aa1.23□□□□□ -2.21
SNX27-205ENST00000482791 A0A096LPI6 279 aa1.23□□□□□ -2.21
SNX27-205ENST00000482791 TRBV6-7A0A0A0MS04 114 aa1.23□□□□□ -2.21
SNX27-205ENST00000482791 ZNF727A8MUV8 499 aa1.23□□□□□ -2.21
SNX27-205ENST00000482791 INE1O15225 51 aa1.23□□□□□ -2.21
SNX27-205ENST00000482791 KLF7O75840 302 aaPredicted RBP1.23□□□□□ -2.21
SNX27-205ENST00000482791 PRB1P04280 392 aa1.23□□□□□ -2.21
SNX27-205ENST00000482791 COX7CP15954 63 aa1.23□□□□□ -2.21
SNX27-205ENST00000482791 SNRPD3P62318 126 aaKnown RBP1.23□□□□□ -2.21
SNX27-205ENST00000482791 ZNF431Q8TF32 576 aaPredicted RBP1.23□□□□□ -2.21
SNX27-205ENST00000482791 SMIM3Q9BZL3 60 aa1.23□□□□□ -2.21
SNX27-205ENST00000482791 COL1A1P02452 1464 aaPredicted RBP1.23□□□□□ -2.21
SNX27-205ENST00000482791 IGKV2-40A0A087WW87 121 aaPredicted RBP1.22□□□□□ -2.21
SNX27-205ENST00000482791 IGKV2-29A2NJV5 120 aaPredicted RBP1.22□□□□□ -2.21
SNX27-205ENST00000482791 H3BRM9 83 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 M0R2N4 97 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 GEMIN2O14893 280 aaKnown RBP1.22□□□□□ -2.21
SNX27-205ENST00000482791 NUPR1O60356 82 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 IGKV2D-40P01614 121 aaPredicted RBP1.22□□□□□ -2.21
SNX27-205ENST00000482791 CD14P08571 375 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 CCL4P13236 92 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 SARNPP82979 210 aaKnown RBP1.22□□□□□ -2.21
SNX27-205ENST00000482791 GLIPR1L1Q6UWM5 242 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 CASC2Q6XLA1 102 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 OR8J3Q8NGG0 315 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 C10orf105Q8TEF2 133 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 COPZ2Q9P299 210 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 MUC4Q99102 2169 aa1.22□□□□□ -2.21
SNX27-205ENST00000482791 ZCCHC6Q5VYS8 1495 aaKnown RBP1.22□□□□□ -2.21
SNX27-205ENST00000482791 MYO18AQ92614 2054 aaKnown RBP1.22□□□□□ -2.21
SNX27-205ENST00000482791 ADGRB2O60241 1585 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 PTPRDP23468 1912 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 ANK1P16157 1881 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 HMGN1P05114 100 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 MPC1LP0DKB6 136 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 PCBD1P61457 104 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 QRFPP83859 136 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 NEDD8Q15843 81 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 OR4S1Q8NGB4 309 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 OR10AG1Q8NH19 301 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 OTOSQ8NHW6 89 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 KIAA1549LQ6ZVL6 1849 aa1.21□□□□□ -2.22
SNX27-205ENST00000482791 FGD6Q6ZV73 1430 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms