RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 TMEM213A2RRL7 107 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 BMPR1BO00238 502 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 LY6HO94772 140 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 CA1P00915 261 aaPredicted RBP5.97□□□□□ -1.45
SNX13-208ENST00000482558 IGHV3-48P01763 117 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 APCSP02743 223 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 IL4P05112 153 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 CBLN1P23435 193 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 KLRD1Q13241 179 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 Q56UQ5 140 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 PDZD11Q5EBL8 140 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 LDLRAD2Q5SZI1 272 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 TMEM136Q6ZRR5 245 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 PRSS22Q9GZN4 317 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 KLK15Q9H2R5 256 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 RPP21Q9H633 154 aaKnown RBP5.97□□□□□ -1.45
SNX13-208ENST00000482558 NAV3Q8IVL0 2385 aa5.97□□□□□ -1.45
SNX13-208ENST00000482558 TRBV7-1A0A0A6YYK4 115 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 C19orf71A6NCJ1 209 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 M0QZK8 103 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 NPFFO15130 113 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 ATP5LO75964 103 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 BRI3O95415 125 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 IGLC2P0DOY2 106 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 GZMBP10144 247 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 FOXA3P55318 350 aaPredicted RBP5.96□□□□□ -1.46
SNX13-208ENST00000482558 RAB4BP61018 213 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 PAX8Q06710 450 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 Q8N9W7 124 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 DLX4Q92988 240 aaPredicted RBP5.96□□□□□ -1.46
SNX13-208ENST00000482558 TBX15Q96SF7 602 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 BPESC1Q9GZL8 116 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 ZNF586Q9NXT0 402 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 RABAC1Q9UI14 185 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 DMXL2Q8TDJ6 3036 aa5.96□□□□□ -1.46
SNX13-208ENST00000482558 IGHV3-21A0A0B4J1V1 117 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 IGHV7-81A0A0B4J1V7 117 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 H3BUA1 57 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 APELAP0DMC3 54 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 CT45A10P0DMU9 189 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 IGHV4-31P0DP07 118 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 SAA4P35542 130 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 CRIP2P52943 208 aaPredicted RBP5.95□□□□□ -1.46
SNX13-208ENST00000482558 DLX1P56177 255 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 HBBP68871 147 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 DEFA6Q01524 100 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 C1orf194Q5T5A4 169 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 SUMO4Q6EEV6 95 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 Q86TA4 180 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 CIARTQ8N365 385 aaPredicted RBP5.95□□□□□ -1.46
SNX13-208ENST00000482558 SIGLECL1Q8N7X8 197 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 PRR26Q8N8Z3 221 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 NUP35Q8NFH5 326 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 EEF1AKMT3Q96AZ1 226 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 ZNF414Q96IQ9 312 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 CCL19Q99731 98 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 SAMD10Q9BYL1 202 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 LAMA5O15230 3695 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 ATMQ13315 3056 aa5.95□□□□□ -1.46
SNX13-208ENST00000482558 CENPVL3A0A0U1RRI6 287 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 A0A1W2PPR1 153 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 FAM223BA6NKX1 122 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 HIGD1CA8MV81 97 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 MRPS12O15235 138 aaKnown RBP5.94□□□□□ -1.46
SNX13-208ENST00000482558 SNAI2O43623 268 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 GAGE7O76087 117 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 GAGE12FP0CL80 117 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 GAGE12GP0CL81 117 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 GAGE12IP0CL82 117 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 PAX1P15863 534 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 KRTAP10-9P60411 292 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 RPS20P60866 119 aaKnown RBP5.94□□□□□ -1.46
SNX13-208ENST00000482558 GNG5P63218 68 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 GAGE1Q13065 139 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 GAGE4Q13068 117 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 RIGQ13278 110 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 UNQ5815/PRO19632Q6UWF5 114 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 TOMM20LQ6UXN7 152 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 FAM223AQ8IWN6 122 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 ZNF502Q8TBZ5 544 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 BORCS7Q96B45 105 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 KCNS1Q96KK3 526 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 LINC00479Q96M42 142 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 NRN1Q9NPD7 142 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 MOB4Q9Y3A3 225 aa5.94□□□□□ -1.46
SNX13-208ENST00000482558 NBEAQ8NFP9 2946 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 HIVEP3Q5T1R4 2406 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 IGHV1-69DA0A0B4J2H0 117 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 IGHV4-28A0A0C4DH34 117 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 A0A1B0GXF2 115 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 RBAKDNA6NC62 111 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 A8MWP6 167 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 LINC00587B1AMM8 73 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 SERF1AO75920 110 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 IGHV1-69P01742 117 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 IGHV4-39P01824 125 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 CTSGP08311 255 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 GATA1P15976 413 aaPredicted RBP5.93□□□□□ -1.46
SNX13-208ENST00000482558 TCL1AP56279 114 aa5.93□□□□□ -1.46
SNX13-208ENST00000482558 PRB3Q04118 309 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms