RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 I3L3M4 83 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 FUSP35637 526 aaKnown RBP eCLIP9.32□□□□□ -0.927e-12■■□□□ 13.6
TRIM27-205ENST00000481474 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 IGKV1-9A0A0C4DH69 117 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 LINC00479Q96M42 142 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 SIGLEC8Q9NYZ4 499 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 SHPRHQ149N8 1683 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 H2BFSP57053 126 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 DEFB113Q30KQ7 82 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 Q6Q795 121 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 CD300LDQ6UXZ3 194 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 C9orf139Q6ZV77 190 aa9.32□□□□□ -0.92
TRIM27-205ENST00000481474 TMEM14DPA8MWL7 114 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 B5MCH6 92 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 IGHG2P01859 326 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 SHANK1Q9Y566 2161 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 IRF3Q14653 427 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 ANKRD29Q8N6D5 301 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 STPG4Q8N801 248 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 TMEM14BQ9NUH8 114 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 C9orf85Q96MD7 179 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 SORL1Q92673 2214 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 OR11H6Q8NGC7 330 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 LTBP4Q8N2S1 1624 aa9.31□□□□□ -0.92
TRIM27-205ENST00000481474 DANCRP0C864 163 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 HSD52Q0P140 79 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 SLC25A48Q6ZT89 311 aaKnown RBP9.3□□□□□ -0.92
TRIM27-205ENST00000481474 IGKV1-12A0A0C4DH73 117 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 A0A1B0GX51 115 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 ZNF497Q6ZNH5 498 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 PPDPFQ9H3Y8 114 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 ZNF236Q9UL36 1845 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 TMEM213A2RRL7 107 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 IGKV1D-37A0A075B6S9 117 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 A0A1B0GWJ7 208 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 PLA2G2AP14555 144 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 GGNQ86UU5 652 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 WBP1Q96G27 269 aa9.3□□□□□ -0.92
TRIM27-205ENST00000481474 MRPL36Q9P0J6 103 aaKnown RBP9.29□□□□□ -0.92
TRIM27-205ENST00000481474 INAFM1C9JVW0 142 aa9.29□□□□□ -0.92
TRIM27-205ENST00000481474 K7ERS5 55 aa9.29□□□□□ -0.92
TRIM27-205ENST00000481474 K7ENP7 123 aa9.29□□□□□ -0.92
TRIM27-205ENST00000481474 SERTAD4-AS1Q5TG53 156 aa9.29□□□□□ -0.92
TRIM27-205ENST00000481474 LYPD6Q86Y78 171 aa9.29□□□□□ -0.92
TRIM27-205ENST00000481474 ZNF883P0CG24 379 aa9.29□□□□□ -0.92
TRIM27-205ENST00000481474 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
TRIM27-205ENST00000481474 PQLC2LA1A4F0 135 aa9.29□□□□□ -0.92
TRIM27-205ENST00000481474 HOXB4P17483 251 aaPredicted RBP9.29□□□□□ -0.92
TRIM27-205ENST00000481474 TRAV13-2A0A0B4J235 113 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 NDUFB8O95169 186 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 ATAD5Q96QE3 1844 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 M0R1W7 72 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 GFI1Q99684 422 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 C1orf100Q5SVJ3 147 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 PPBPP02775 128 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 ZNF362Q5T0B9 420 aaPredicted RBP9.28□□□□□ -0.92
TRIM27-205ENST00000481474 CD200R1LQ6Q8B3 271 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 LINC01551Q86U37 167 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 C11orf45Q8TAV5 145 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 ITGB4P16144 1822 aa9.28□□□□□ -0.92
TRIM27-205ENST00000481474 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.92
TRIM27-205ENST00000481474 IGLV2-8P01709 118 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 NHLRC3Q5JS37 347 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 PKIGQ9Y2B9 76 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 H0YJW9 148 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 FGF6P10767 208 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 GRNP28799 593 aaKnown RBP9.27□□□□□ -0.93
TRIM27-205ENST00000481474 POU2AF1Q16633 256 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 VSIG2Q96IQ7 327 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 EML6Q6ZMW3 1958 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 GNRH2O43555 120 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 NDUFC2O95298 119 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 IGKV1-17P01599 117 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 EIF4EBP2Q13542 120 aaPredicted RBP9.27□□□□□ -0.93
TRIM27-205ENST00000481474 ZC2HC1BQ5TFG8 222 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 LINC00299Q6ZSB3 139 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 SMIM20Q8N5G0 67 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 GREB1Q4ZG55 1949 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 LY6G6EA0A0G2JKS1 128 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 RFNGQ9Y644 331 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 DDX60LQ5H9U9 1706 aaKnown RBP9.27□□□□□ -0.93
TRIM27-205ENST00000481474 IGHV4-38-2P0DP08 117 aa9.27□□□□□ -0.93
TRIM27-205ENST00000481474 K7ERJ3 54 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 MP68P56378 58 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 GAFA1Q96PS6 74 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 LOC105371267A0A1B0GV96 52 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 GATA3P23771 443 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 PRR20EP86478 221 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 PRR20CP86479 221 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 PRR20DP86480 221 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 PRR20BP86481 221 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 PRR20AP86496 221 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 WFDC10BQ8IUB3 73 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 SIRPDQ9H106 197 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 DOPEY1Q5JWR5 2465 aa9.26□□□□□ -0.93
TRIM27-205ENST00000481474 CCL20P78556 96 aa9.25□□□□□ -0.93
TRIM27-205ENST00000481474 PFN1P07737 140 aaKnown RBP9.25□□□□□ -0.93
TRIM27-205ENST00000481474 RHOHQ15669 191 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms